Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDHR3Q6ZTQ4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDHR3Q6ZTQ4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.3■□□□□ 0.52
CDHR3Q6ZTQ4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDHR3Q6ZTQ4 TERF1P1-201ENST00000311003 1181 ntBASIC18.3■□□□□ 0.52
CDHR3Q6ZTQ4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDHR3Q6ZTQ4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDHR3Q6ZTQ4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.3■□□□□ 0.52
CDHR3Q6ZTQ4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDHR3Q6ZTQ4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDHR3Q6ZTQ4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CDHR3Q6ZTQ4 AC116562.4-202ENST00000641738 218 ntBASIC18.3■□□□□ 0.52
CDHR3Q6ZTQ4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDHR3Q6ZTQ4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDHR3Q6ZTQ4 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.3■□□□□ 0.52
CDHR3Q6ZTQ4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.3■□□□□ 0.52
CDHR3Q6ZTQ4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.3■□□□□ 0.52
CDHR3Q6ZTQ4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDHR3Q6ZTQ4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDHR3Q6ZTQ4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDHR3Q6ZTQ4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 AC099398.1-201ENST00000567919 2776 ntBASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 AC009053.2-201ENST00000563701 2365 ntBASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 TMPOP1-202ENST00000424642 1267 ntBASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 AL137013.1-201ENST00000432946 1228 ntBASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 KRT18P57-201ENST00000443599 1254 ntBASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 CCR12P-201ENST00000446203 998 ntBASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 AC092865.7-201ENST00000641832 219 ntBASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 AC108860.2-201ENST00000562760 2183 ntBASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 PCDHA12-202ENST00000613593 2588 ntBASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDHR3Q6ZTQ4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDHR3Q6ZTQ4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.28■□□□□ 0.52
CDHR3Q6ZTQ4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.28■□□□□ 0.52
CDHR3Q6ZTQ4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.28■□□□□ 0.52
CDHR3Q6ZTQ4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDHR3Q6ZTQ4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CDHR3Q6ZTQ4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CDHR3Q6ZTQ4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.28■□□□□ 0.52
CDHR3Q6ZTQ4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDHR3Q6ZTQ4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDHR3Q6ZTQ4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
CDHR3Q6ZTQ4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDHR3Q6ZTQ4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDHR3Q6ZTQ4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.28■□□□□ 0.52
CDHR3Q6ZTQ4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDHR3Q6ZTQ4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDHR3Q6ZTQ4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CDHR3Q6ZTQ4 MIR564-202ENST00000385049 94 ntBASIC18.28■□□□□ 0.52
CDHR3Q6ZTQ4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.28■□□□□ 0.52
CDHR3Q6ZTQ4 AC010203.1-204ENST00000548782 407 ntBASIC18.28■□□□□ 0.52
CDHR3Q6ZTQ4 AL023803.3-201ENST00000615559 522 ntBASIC18.28■□□□□ 0.52
CDHR3Q6ZTQ4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CDHR3Q6ZTQ4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDHR3Q6ZTQ4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDHR3Q6ZTQ4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDHR3Q6ZTQ4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDHR3Q6ZTQ4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDHR3Q6ZTQ4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.28■□□□□ 0.52
CDHR3Q6ZTQ4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDHR3Q6ZTQ4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDHR3Q6ZTQ4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDHR3Q6ZTQ4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDHR3Q6ZTQ4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.27■□□□□ 0.52
CDHR3Q6ZTQ4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDHR3Q6ZTQ4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CDHR3Q6ZTQ4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDHR3Q6ZTQ4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDHR3Q6ZTQ4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.27■□□□□ 0.52
CDHR3Q6ZTQ4 GMCL1P1-201ENST00000463439 1581 ntBASIC18.27■□□□□ 0.52
CDHR3Q6ZTQ4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.27■□□□□ 0.52
CDHR3Q6ZTQ4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms