Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 AL121956.5-201ENST00000625261 221 ntBASIC17.1■□□□□ 0.33
RTL4Q6ZR62 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 HOXB1-202ENST00000577092 1414 ntBASIC17.1■□□□□ 0.33
RTL4Q6ZR62 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTL4Q6ZR62 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTL4Q6ZR62 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTL4Q6ZR62 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTL4Q6ZR62 AL390961.4-201ENST00000623958 2535 ntBASIC17.09■□□□□ 0.33
RTL4Q6ZR62 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTL4Q6ZR62 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTL4Q6ZR62 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RTL4Q6ZR62 SPDYE15P-201ENST00000424157 909 ntBASIC17.09■□□□□ 0.33
RTL4Q6ZR62 AC112907.2-201ENST00000448639 330 ntBASIC17.09■□□□□ 0.33
RTL4Q6ZR62 RASA4DP-201ENST00000460726 1199 ntBASIC17.09■□□□□ 0.33
RTL4Q6ZR62 SEC1P-202ENST00000473944 940 ntBASIC17.09■□□□□ 0.33
RTL4Q6ZR62 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTL4Q6ZR62 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTL4Q6ZR62 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.09■□□□□ 0.33
RTL4Q6ZR62 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RTL4Q6ZR62 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTL4Q6ZR62 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.09■□□□□ 0.33
RTL4Q6ZR62 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RTL4Q6ZR62 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RTL4Q6ZR62 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RTL4Q6ZR62 HEIH-201ENST00000623091 1652 ntBASIC17.09■□□□□ 0.33
RTL4Q6ZR62 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTL4Q6ZR62 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTL4Q6ZR62 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RTL4Q6ZR62 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RTL4Q6ZR62 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RTL4Q6ZR62 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RTL4Q6ZR62 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTL4Q6ZR62 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTL4Q6ZR62 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RTL4Q6ZR62 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.08■□□□□ 0.33
RTL4Q6ZR62 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
RTL4Q6ZR62 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.08■□□□□ 0.33
RTL4Q6ZR62 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RTL4Q6ZR62 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
RTL4Q6ZR62 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
RTL4Q6ZR62 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RTL4Q6ZR62 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.08■□□□□ 0.32
RTL4Q6ZR62 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.08■□□□□ 0.32
RTL4Q6ZR62 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.08■□□□□ 0.32
RTL4Q6ZR62 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.08■□□□□ 0.32
RTL4Q6ZR62 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RTL4Q6ZR62 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.08■□□□□ 0.32
RTL4Q6ZR62 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RTL4Q6ZR62 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.08■□□□□ 0.32
RTL4Q6ZR62 BICD1-207ENST00000551848 1962 ntBASIC17.08■□□□□ 0.32
RTL4Q6ZR62 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
RTL4Q6ZR62 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.07■□□□□ 0.32
RTL4Q6ZR62 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms