Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
CCDC141Q6ZP82 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
CCDC141Q6ZP82 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CCDC141Q6ZP82 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC27.05■■□□□ 1.92
CCDC141Q6ZP82 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CCDC141Q6ZP82 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CCDC141Q6ZP82 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CCDC141Q6ZP82 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CCDC141Q6ZP82 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CCDC141Q6ZP82 GPX1P2-201ENST00000429271 606 ntBASIC27.05■■□□□ 1.92
CCDC141Q6ZP82 SRP19-202ENST00000445150 833 ntTSL 2 BASIC27.05■■□□□ 1.92
CCDC141Q6ZP82 HS6ST1P1-201ENST00000481504 1234 ntBASIC27.05■■□□□ 1.92
CCDC141Q6ZP82 AC105339.3-201ENST00000560043 636 ntBASIC27.05■■□□□ 1.92
CCDC141Q6ZP82 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC27.05■■□□□ 1.92
CCDC141Q6ZP82 AC010327.4-202ENST00000591484 748 ntBASIC27.05■■□□□ 1.92
CCDC141Q6ZP82 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CCDC141Q6ZP82 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
CCDC141Q6ZP82 PMPCAP1-201ENST00000508114 1576 ntBASIC27.05■■□□□ 1.92
CCDC141Q6ZP82 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC27.05■■□□□ 1.92
CCDC141Q6ZP82 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CCDC141Q6ZP82 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
CCDC141Q6ZP82 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
CCDC141Q6ZP82 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
CCDC141Q6ZP82 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CCDC141Q6ZP82 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC27.04■■□□□ 1.92
CCDC141Q6ZP82 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CCDC141Q6ZP82 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC27.04■■□□□ 1.92
CCDC141Q6ZP82 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC27.04■■□□□ 1.92
CCDC141Q6ZP82 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
CCDC141Q6ZP82 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CCDC141Q6ZP82 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
CCDC141Q6ZP82 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
CCDC141Q6ZP82 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC27.04■■□□□ 1.92
CCDC141Q6ZP82 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC27.03■■□□□ 1.92
CCDC141Q6ZP82 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CCDC141Q6ZP82 AC073130.3-201ENST00000624389 2278 ntBASIC27.03■■□□□ 1.92
CCDC141Q6ZP82 AC116562.4-201ENST00000641316 2276 ntBASIC27.03■■□□□ 1.92
CCDC141Q6ZP82 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
CCDC141Q6ZP82 UNC93B6-202ENST00000528242 690 ntBASIC27.03■■□□□ 1.92
CCDC141Q6ZP82 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC27.03■■□□□ 1.92
CCDC141Q6ZP82 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC27.03■■□□□ 1.92
CCDC141Q6ZP82 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC27.03■■□□□ 1.92
CCDC141Q6ZP82 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
CCDC141Q6ZP82 AC097374.2-201ENST00000618617 1306 ntBASIC27.02■■□□□ 1.92
CCDC141Q6ZP82 SIGLEC16-201ENST00000599858 1437 ntBASIC27.02■■□□□ 1.92
CCDC141Q6ZP82 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CCDC141Q6ZP82 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC27.02■■□□□ 1.92
CCDC141Q6ZP82 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC27.02■■□□□ 1.92
CCDC141Q6ZP82 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC27.02■■□□□ 1.92
CCDC141Q6ZP82 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC27.02■■□□□ 1.92
CCDC141Q6ZP82 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CCDC141Q6ZP82 ETFA-208ENST00000559602 792 ntTSL 3 BASIC27.02■■□□□ 1.92
CCDC141Q6ZP82 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC27.02■■□□□ 1.92
CCDC141Q6ZP82 AC093010.1-201ENST00000473625 1624 ntBASIC27.02■■□□□ 1.92
CCDC141Q6ZP82 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC27.02■■□□□ 1.92
CCDC141Q6ZP82 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC27.02■■□□□ 1.92
CCDC141Q6ZP82 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC27.02■■□□□ 1.92
CCDC141Q6ZP82 GMCL1P1-201ENST00000463439 1581 ntBASIC27.02■■□□□ 1.92
CCDC141Q6ZP82 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC27.02■■□□□ 1.92
CCDC141Q6ZP82 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC27.02■■□□□ 1.92
CCDC141Q6ZP82 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC27.02■■□□□ 1.92
CCDC141Q6ZP82 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC27.01■■□□□ 1.92
CCDC141Q6ZP82 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CCDC141Q6ZP82 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CCDC141Q6ZP82 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC27.01■■□□□ 1.91
CCDC141Q6ZP82 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC27.01■■□□□ 1.91
CCDC141Q6ZP82 AC005104.2-201ENST00000427818 678 ntBASIC27.01■■□□□ 1.91
CCDC141Q6ZP82 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
CCDC141Q6ZP82 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC27.01■■□□□ 1.91
CCDC141Q6ZP82 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC27.01■■□□□ 1.91
CCDC141Q6ZP82 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC27.01■■□□□ 1.91
CCDC141Q6ZP82 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC27.01■■□□□ 1.91
CCDC141Q6ZP82 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC27.01■■□□□ 1.91
CCDC141Q6ZP82 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC27.01■■□□□ 1.91
CCDC141Q6ZP82 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CCDC141Q6ZP82 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CCDC141Q6ZP82 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CCDC141Q6ZP82 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
CCDC141Q6ZP82 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CCDC141Q6ZP82 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CCDC141Q6ZP82 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CCDC141Q6ZP82 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC27■■□□□ 1.91
CCDC141Q6ZP82 CD9-202ENST00000382515 1229 ntTSL 5 BASIC27■■□□□ 1.91
CCDC141Q6ZP82 YBX2P1-201ENST00000394192 760 ntBASIC27■■□□□ 1.91
CCDC141Q6ZP82 IMP4-203ENST00000409935 958 ntTSL 5 BASIC27■■□□□ 1.91
CCDC141Q6ZP82 AC009947.1-201ENST00000444350 727 ntBASIC27■■□□□ 1.91
CCDC141Q6ZP82 BX005266.1-201ENST00000473402 457 ntBASIC27■■□□□ 1.91
CCDC141Q6ZP82 AC122714.2-201ENST00000502787 707 ntBASIC27■■□□□ 1.91
CCDC141Q6ZP82 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC27■■□□□ 1.91
CCDC141Q6ZP82 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC27■■□□□ 1.91
CCDC141Q6ZP82 SDCCAG3P1-201ENST00000589292 1150 ntBASIC27■■□□□ 1.91
CCDC141Q6ZP82 AD001527.2-201ENST00000622994 785 ntBASIC27■■□□□ 1.91
CCDC141Q6ZP82 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC27■■□□□ 1.91
CCDC141Q6ZP82 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC27■■□□□ 1.91
CCDC141Q6ZP82 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
CCDC141Q6ZP82 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CCDC141Q6ZP82 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
CCDC141Q6ZP82 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CCDC141Q6ZP82 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC27■■□□□ 1.91
CCDC141Q6ZP82 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC27■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms