Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.37■□□□□ 0.21
NHLRC1Q6VVB1 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.37■□□□□ 0.21
NHLRC1Q6VVB1 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NHLRC1Q6VVB1 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NHLRC1Q6VVB1 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
NHLRC1Q6VVB1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.37■□□□□ 0.21
NHLRC1Q6VVB1 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.37■□□□□ 0.21
NHLRC1Q6VVB1 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NHLRC1Q6VVB1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NHLRC1Q6VVB1 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
NHLRC1Q6VVB1 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
NHLRC1Q6VVB1 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NHLRC1Q6VVB1 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.37■□□□□ 0.21
NHLRC1Q6VVB1 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.37■□□□□ 0.21
NHLRC1Q6VVB1 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.37■□□□□ 0.21
NHLRC1Q6VVB1 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.37■□□□□ 0.21
NHLRC1Q6VVB1 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NHLRC1Q6VVB1 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.37■□□□□ 0.21
NHLRC1Q6VVB1 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.37■□□□□ 0.21
NHLRC1Q6VVB1 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.37■□□□□ 0.21
NHLRC1Q6VVB1 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.37■□□□□ 0.21
NHLRC1Q6VVB1 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NHLRC1Q6VVB1 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NHLRC1Q6VVB1 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NHLRC1Q6VVB1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NHLRC1Q6VVB1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NHLRC1Q6VVB1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
NHLRC1Q6VVB1 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
NHLRC1Q6VVB1 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NHLRC1Q6VVB1 AC099398.1-201ENST00000567919 2776 ntBASIC16.37■□□□□ 0.21
NHLRC1Q6VVB1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.37■□□□□ 0.21
NHLRC1Q6VVB1 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NHLRC1Q6VVB1 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 TERF1P1-201ENST00000311003 1181 ntBASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 AC113347.1-201ENST00000413321 391 ntBASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 MIR3917-201ENST00000580971 93 ntBASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 LINC01126-201ENST00000623515 1646 ntBASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NHLRC1Q6VVB1 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 AC099343.3-201ENST00000605834 2503 ntBASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 GCSHP2-201ENST00000560971 527 ntBASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 AC005363.2-201ENST00000618631 242 ntBASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 AL024508.2-201ENST00000607749 1894 ntBASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms