Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.56■□□□□ 0.88
SHC4Q6S5L8 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.56■□□□□ 0.88
SHC4Q6S5L8 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.56■□□□□ 0.88
SHC4Q6S5L8 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SHC4Q6S5L8 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.56■□□□□ 0.88
SHC4Q6S5L8 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
SHC4Q6S5L8 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SHC4Q6S5L8 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SHC4Q6S5L8 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SHC4Q6S5L8 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.56■□□□□ 0.88
SHC4Q6S5L8 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHC4Q6S5L8 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHC4Q6S5L8 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.56■□□□□ 0.88
SHC4Q6S5L8 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHC4Q6S5L8 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHC4Q6S5L8 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHC4Q6S5L8 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SHC4Q6S5L8 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHC4Q6S5L8 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.56■□□□□ 0.88
SHC4Q6S5L8 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SHC4Q6S5L8 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SHC4Q6S5L8 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SHC4Q6S5L8 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.55■□□□□ 0.88
SHC4Q6S5L8 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SHC4Q6S5L8 LTB4R2-202ENST00000528054 3092 ntBASIC20.55■□□□□ 0.88
SHC4Q6S5L8 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SHC4Q6S5L8 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
SHC4Q6S5L8 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SHC4Q6S5L8 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SHC4Q6S5L8 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.55■□□□□ 0.88
SHC4Q6S5L8 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
SHC4Q6S5L8 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SHC4Q6S5L8 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SHC4Q6S5L8 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.55■□□□□ 0.88
SHC4Q6S5L8 NEK4P2-201ENST00000580004 1012 ntBASIC20.55■□□□□ 0.88
SHC4Q6S5L8 MIR3917-201ENST00000580971 93 ntBASIC20.55■□□□□ 0.88
SHC4Q6S5L8 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
SHC4Q6S5L8 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.55■□□□□ 0.88
SHC4Q6S5L8 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SHC4Q6S5L8 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SHC4Q6S5L8 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SHC4Q6S5L8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SHC4Q6S5L8 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SHC4Q6S5L8 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.54■□□□□ 0.88
SHC4Q6S5L8 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.54■□□□□ 0.88
SHC4Q6S5L8 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SHC4Q6S5L8 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.54■□□□□ 0.88
SHC4Q6S5L8 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHC4Q6S5L8 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHC4Q6S5L8 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHC4Q6S5L8 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHC4Q6S5L8 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.54■□□□□ 0.88
SHC4Q6S5L8 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHC4Q6S5L8 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.54■□□□□ 0.88
SHC4Q6S5L8 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.54■□□□□ 0.88
SHC4Q6S5L8 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.54■□□□□ 0.88
SHC4Q6S5L8 AC093827.2-201ENST00000512654 315 ntBASIC20.54■□□□□ 0.88
SHC4Q6S5L8 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.54■□□□□ 0.88
SHC4Q6S5L8 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.54■□□□□ 0.88
SHC4Q6S5L8 LINC01568-207ENST00000641790 1380 ntBASIC20.54■□□□□ 0.88
SHC4Q6S5L8 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHC4Q6S5L8 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SHC4Q6S5L8 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.54■□□□□ 0.88
SHC4Q6S5L8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHC4Q6S5L8 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SHC4Q6S5L8 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHC4Q6S5L8 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SHC4Q6S5L8 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHC4Q6S5L8 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHC4Q6S5L8 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.54■□□□□ 0.88
SHC4Q6S5L8 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHC4Q6S5L8 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.53■□□□□ 0.88
SHC4Q6S5L8 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
SHC4Q6S5L8 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHC4Q6S5L8 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHC4Q6S5L8 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHC4Q6S5L8 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHC4Q6S5L8 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHC4Q6S5L8 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHC4Q6S5L8 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.53■□□□□ 0.88
SHC4Q6S5L8 ECEL1P3-201ENST00000427961 737 ntBASIC20.53■□□□□ 0.88
SHC4Q6S5L8 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.53■□□□□ 0.88
SHC4Q6S5L8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHC4Q6S5L8 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHC4Q6S5L8 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SHC4Q6S5L8 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.53■□□□□ 0.88
SHC4Q6S5L8 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHC4Q6S5L8 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SHC4Q6S5L8 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHC4Q6S5L8 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
SHC4Q6S5L8 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SHC4Q6S5L8 AIRN-201ENST00000601203 4374 ntBASIC20.53■□□□□ 0.88
SHC4Q6S5L8 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.52■□□□□ 0.88
SHC4Q6S5L8 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
SHC4Q6S5L8 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHC4Q6S5L8 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.52■□□□□ 0.88
SHC4Q6S5L8 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SHC4Q6S5L8 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHC4Q6S5L8 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.52■□□□□ 0.88
SHC4Q6S5L8 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms