Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KCNIP4Q6PIL6 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
KCNIP4Q6PIL6 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.15□□□□□ -0.14
KCNIP4Q6PIL6 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KCNIP4Q6PIL6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
KCNIP4Q6PIL6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
KCNIP4Q6PIL6 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
KCNIP4Q6PIL6 AC004854.2-201ENST00000608450 1441 ntBASIC14.15□□□□□ -0.14
KCNIP4Q6PIL6 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
KCNIP4Q6PIL6 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
KCNIP4Q6PIL6 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCNIP4Q6PIL6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 AL596257.1-201ENST00000641463 2694 ntBASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 NTF6G-201ENST00000591094 616 ntBASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 AC019069.1-201ENST00000610008 1333 ntBASIC14.13□□□□□ -0.15
KCNIP4Q6PIL6 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms