Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 HLA-DQB1-201ENST00000374943 1656 ntBASIC13.79□□□□□ -0.2
MRPL54Q6P161 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MRPL54Q6P161 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MRPL54Q6P161 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
MRPL54Q6P161 PCDHB19P-201ENST00000570871 2371 ntBASIC13.79□□□□□ -0.2
MRPL54Q6P161 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
MRPL54Q6P161 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
MRPL54Q6P161 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
MRPL54Q6P161 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.79□□□□□ -0.2
MRPL54Q6P161 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
MRPL54Q6P161 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
MRPL54Q6P161 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC13.79□□□□□ -0.2
MRPL54Q6P161 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC13.79□□□□□ -0.2
MRPL54Q6P161 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
MRPL54Q6P161 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.79□□□□□ -0.2
MRPL54Q6P161 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
MRPL54Q6P161 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
MRPL54Q6P161 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MRPL54Q6P161 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
MRPL54Q6P161 AC008556.1-201ENST00000610908 2040 ntBASIC13.79□□□□□ -0.2
MRPL54Q6P161 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
MRPL54Q6P161 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
MRPL54Q6P161 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
MRPL54Q6P161 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC13.79□□□□□ -0.2
MRPL54Q6P161 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
MRPL54Q6P161 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MRPL54Q6P161 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
MRPL54Q6P161 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
MRPL54Q6P161 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
MRPL54Q6P161 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC13.79□□□□□ -0.2
MRPL54Q6P161 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
MRPL54Q6P161 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC13.79□□□□□ -0.2
MRPL54Q6P161 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MRPL54Q6P161 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MRPL54Q6P161 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
MRPL54Q6P161 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
MRPL54Q6P161 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MRPL54Q6P161 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MRPL54Q6P161 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
MRPL54Q6P161 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MRPL54Q6P161 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
MRPL54Q6P161 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.78□□□□□ -0.2
MRPL54Q6P161 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MRPL54Q6P161 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
MRPL54Q6P161 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MRPL54Q6P161 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MRPL54Q6P161 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.78□□□□□ -0.2
MRPL54Q6P161 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.78□□□□□ -0.2
MRPL54Q6P161 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
MRPL54Q6P161 YBX1P10-201ENST00000444752 975 ntBASIC13.78□□□□□ -0.2
MRPL54Q6P161 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC13.78□□□□□ -0.2
MRPL54Q6P161 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MRPL54Q6P161 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
MRPL54Q6P161 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
MRPL54Q6P161 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MRPL54Q6P161 AP006587.1-201ENST00000534129 1502 ntBASIC13.78□□□□□ -0.2
MRPL54Q6P161 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MRPL54Q6P161 RCC2P6-201ENST00000526625 1557 ntBASIC13.78□□□□□ -0.2
MRPL54Q6P161 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MRPL54Q6P161 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MRPL54Q6P161 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MRPL54Q6P161 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC13.78□□□□□ -0.2
MRPL54Q6P161 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MRPL54Q6P161 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC13.78□□□□□ -0.2
MRPL54Q6P161 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
MRPL54Q6P161 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
MRPL54Q6P161 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MRPL54Q6P161 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC13.78□□□□□ -0.2
MRPL54Q6P161 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
MRPL54Q6P161 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
MRPL54Q6P161 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
MRPL54Q6P161 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MRPL54Q6P161 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
MRPL54Q6P161 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MRPL54Q6P161 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
MRPL54Q6P161 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.2
MRPL54Q6P161 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.2
MRPL54Q6P161 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
MRPL54Q6P161 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC13.77□□□□□ -0.21
MRPL54Q6P161 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC13.77□□□□□ -0.21
MRPL54Q6P161 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MRPL54Q6P161 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MRPL54Q6P161 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MRPL54Q6P161 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MRPL54Q6P161 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MRPL54Q6P161 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
MRPL54Q6P161 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MRPL54Q6P161 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MRPL54Q6P161 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MRPL54Q6P161 SERP1-205ENST00000487153 657 ntTSL 4 BASIC13.77□□□□□ -0.21
MRPL54Q6P161 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC13.77□□□□□ -0.21
MRPL54Q6P161 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
MRPL54Q6P161 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC13.77□□□□□ -0.21
MRPL54Q6P161 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.77□□□□□ -0.21
MRPL54Q6P161 AC006116.8-202ENST00000587620 1550 ntBASIC13.77□□□□□ -0.21
MRPL54Q6P161 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MRPL54Q6P161 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC13.77□□□□□ -0.21
MRPL54Q6P161 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
MRPL54Q6P161 AC068587.6-202ENST00000641839 5619 ntBASIC13.77□□□□□ -0.21
MRPL54Q6P161 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms