Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.12■□□□□ 0.65
RNF43Q68DV7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.12■□□□□ 0.65
RNF43Q68DV7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF43Q68DV7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.12■□□□□ 0.65
RNF43Q68DV7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF43Q68DV7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF43Q68DV7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF43Q68DV7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF43Q68DV7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF43Q68DV7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF43Q68DV7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.12■□□□□ 0.65
RNF43Q68DV7 MIR3180-4-201ENST00000582223 153 ntBASIC19.12■□□□□ 0.65
RNF43Q68DV7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RNF43Q68DV7 AC083906.6-201ENST00000641366 219 ntBASIC19.12■□□□□ 0.65
RNF43Q68DV7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF43Q68DV7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF43Q68DV7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF43Q68DV7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF43Q68DV7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
RNF43Q68DV7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.12■□□□□ 0.65
RNF43Q68DV7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF43Q68DV7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF43Q68DV7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF43Q68DV7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF43Q68DV7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF43Q68DV7 AC034236.2-201ENST00000606662 1610 ntBASIC19.11■□□□□ 0.65
RNF43Q68DV7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF43Q68DV7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF43Q68DV7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF43Q68DV7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
RNF43Q68DV7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.11■□□□□ 0.65
RNF43Q68DV7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF43Q68DV7 ZNF444P1-201ENST00000559497 298 ntBASIC19.11■□□□□ 0.65
RNF43Q68DV7 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.11■□□□□ 0.65
RNF43Q68DV7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.11■□□□□ 0.65
RNF43Q68DV7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF43Q68DV7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF43Q68DV7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF43Q68DV7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
RNF43Q68DV7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
RNF43Q68DV7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF43Q68DV7 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.11■□□□□ 0.65
RNF43Q68DV7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
RNF43Q68DV7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF43Q68DV7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF43Q68DV7 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF43Q68DV7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF43Q68DV7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF43Q68DV7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF43Q68DV7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF43Q68DV7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF43Q68DV7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
RNF43Q68DV7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF43Q68DV7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF43Q68DV7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF43Q68DV7 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.1■□□□□ 0.65
RNF43Q68DV7 AC067852.2-201ENST00000590513 2313 ntBASIC19.1■□□□□ 0.65
RNF43Q68DV7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF43Q68DV7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RNF43Q68DV7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF43Q68DV7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
RNF43Q68DV7 AC246785.2-201ENST00000432512 513 ntBASIC19.1■□□□□ 0.65
RNF43Q68DV7 HLA-F-220ENST00000434407 884 ntBASIC19.1■□□□□ 0.65
RNF43Q68DV7 KRT18P23-201ENST00000435622 1283 ntBASIC19.1■□□□□ 0.65
RNF43Q68DV7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF43Q68DV7 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF43Q68DV7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.1■□□□□ 0.65
RNF43Q68DV7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.1■□□□□ 0.65
RNF43Q68DV7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF43Q68DV7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF43Q68DV7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.1■□□□□ 0.65
RNF43Q68DV7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF43Q68DV7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF43Q68DV7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF43Q68DV7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.1■□□□□ 0.65
RNF43Q68DV7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF43Q68DV7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.1■□□□□ 0.65
RNF43Q68DV7 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
RNF43Q68DV7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF43Q68DV7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF43Q68DV7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF43Q68DV7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF43Q68DV7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RNF43Q68DV7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RNF43Q68DV7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF43Q68DV7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF43Q68DV7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF43Q68DV7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF43Q68DV7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF43Q68DV7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
RNF43Q68DV7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RNF43Q68DV7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF43Q68DV7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF43Q68DV7 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF43Q68DV7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF43Q68DV7 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.09■□□□□ 0.65
RNF43Q68DV7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.09■□□□□ 0.65
RNF43Q68DV7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.09■□□□□ 0.65
RNF43Q68DV7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF43Q68DV7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms