Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 NTF6G-201ENST00000591094 616 ntBASIC17.19■□□□□ 0.34
LPCAT4Q643R3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 AL121906.2-201ENST00000621597 723 ntBASIC17.19■□□□□ 0.34
LPCAT4Q643R3 OR10C1-204ENST00000622521 1039 ntBASIC17.19■□□□□ 0.34
LPCAT4Q643R3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 GMCL1P1-201ENST00000463439 1581 ntBASIC17.19■□□□□ 0.34
LPCAT4Q643R3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
LPCAT4Q643R3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LPCAT4Q643R3 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LPCAT4Q643R3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.18■□□□□ 0.34
LPCAT4Q643R3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.18■□□□□ 0.34
LPCAT4Q643R3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LPCAT4Q643R3 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LPCAT4Q643R3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LPCAT4Q643R3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
LPCAT4Q643R3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.18■□□□□ 0.34
LPCAT4Q643R3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LPCAT4Q643R3 AL160286.2-201ENST00000567150 934 ntBASIC17.18■□□□□ 0.34
LPCAT4Q643R3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LPCAT4Q643R3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
LPCAT4Q643R3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.18■□□□□ 0.34
LPCAT4Q643R3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
LPCAT4Q643R3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LPCAT4Q643R3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LPCAT4Q643R3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LPCAT4Q643R3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LPCAT4Q643R3 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LPCAT4Q643R3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LPCAT4Q643R3 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LPCAT4Q643R3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LPCAT4Q643R3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
LPCAT4Q643R3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LPCAT4Q643R3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LPCAT4Q643R3 PCDHA1-201ENST00000378133 2726 ntBASIC17.17■□□□□ 0.34
LPCAT4Q643R3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LPCAT4Q643R3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LPCAT4Q643R3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LPCAT4Q643R3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LPCAT4Q643R3 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LPCAT4Q643R3 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LPCAT4Q643R3 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.17■□□□□ 0.34
LPCAT4Q643R3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LPCAT4Q643R3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.17■□□□□ 0.34
LPCAT4Q643R3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.17■□□□□ 0.34
LPCAT4Q643R3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.17■□□□□ 0.34
LPCAT4Q643R3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.17■□□□□ 0.34
LPCAT4Q643R3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LPCAT4Q643R3 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.17■□□□□ 0.34
LPCAT4Q643R3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.17■□□□□ 0.34
LPCAT4Q643R3 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LPCAT4Q643R3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.17■□□□□ 0.34
LPCAT4Q643R3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LPCAT4Q643R3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LPCAT4Q643R3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LPCAT4Q643R3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LPCAT4Q643R3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LPCAT4Q643R3 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.17■□□□□ 0.34
LPCAT4Q643R3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LPCAT4Q643R3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
LPCAT4Q643R3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LPCAT4Q643R3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LPCAT4Q643R3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LPCAT4Q643R3 KRT18P55-202ENST00000578578 1546 ntBASIC17.16■□□□□ 0.34
LPCAT4Q643R3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LPCAT4Q643R3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LPCAT4Q643R3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
LPCAT4Q643R3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LPCAT4Q643R3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LPCAT4Q643R3 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.16■□□□□ 0.34
LPCAT4Q643R3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
LPCAT4Q643R3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LPCAT4Q643R3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LPCAT4Q643R3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LPCAT4Q643R3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.16■□□□□ 0.34
LPCAT4Q643R3 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.16■□□□□ 0.34
LPCAT4Q643R3 AL512625.2-201ENST00000417533 625 ntBASIC17.16■□□□□ 0.34
LPCAT4Q643R3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LPCAT4Q643R3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LPCAT4Q643R3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
LPCAT4Q643R3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms