Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCSMST1Q4G0I0 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCSMST1Q4G0I0 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCSMST1Q4G0I0 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCSMST1Q4G0I0 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCSMST1Q4G0I0 AC132938.6-201ENST00000623828 1655 ntBASIC17.69■□□□□ 0.42
CCSMST1Q4G0I0 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCSMST1Q4G0I0 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCSMST1Q4G0I0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.69■□□□□ 0.42
CCSMST1Q4G0I0 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.69■□□□□ 0.42
CCSMST1Q4G0I0 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.69■□□□□ 0.42
CCSMST1Q4G0I0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.69■□□□□ 0.42
CCSMST1Q4G0I0 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.69■□□□□ 0.42
CCSMST1Q4G0I0 RNF126P1-202ENST00000569893 925 ntBASIC17.69■□□□□ 0.42
CCSMST1Q4G0I0 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.69■□□□□ 0.42
CCSMST1Q4G0I0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CCSMST1Q4G0I0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCSMST1Q4G0I0 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCSMST1Q4G0I0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CCSMST1Q4G0I0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.69■□□□□ 0.42
CCSMST1Q4G0I0 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
CCSMST1Q4G0I0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 AC087388.1-201ENST00000571370 1112 ntBASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 AC093010.1-201ENST00000473625 1624 ntBASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.68■□□□□ 0.42
CCSMST1Q4G0I0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCSMST1Q4G0I0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.67■□□□□ 0.42
CCSMST1Q4G0I0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCSMST1Q4G0I0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCSMST1Q4G0I0 LINC00602-201ENST00000629776 2065 ntBASIC17.67■□□□□ 0.42
CCSMST1Q4G0I0 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
CCSMST1Q4G0I0 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCSMST1Q4G0I0 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.67■□□□□ 0.42
CCSMST1Q4G0I0 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCSMST1Q4G0I0 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCSMST1Q4G0I0 KRT18P48-201ENST00000434763 852 ntBASIC17.67■□□□□ 0.42
CCSMST1Q4G0I0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.67■□□□□ 0.42
CCSMST1Q4G0I0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCSMST1Q4G0I0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCSMST1Q4G0I0 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CCSMST1Q4G0I0 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
CCSMST1Q4G0I0 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.67■□□□□ 0.42
CCSMST1Q4G0I0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCSMST1Q4G0I0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCSMST1Q4G0I0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.67■□□□□ 0.42
CCSMST1Q4G0I0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CCSMST1Q4G0I0 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCSMST1Q4G0I0 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCSMST1Q4G0I0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCSMST1Q4G0I0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.67■□□□□ 0.42
CCSMST1Q4G0I0 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCSMST1Q4G0I0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCSMST1Q4G0I0 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCSMST1Q4G0I0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCSMST1Q4G0I0 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCSMST1Q4G0I0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.66■□□□□ 0.42
CCSMST1Q4G0I0 LINC00167-201ENST00000530583 1419 ntBASIC17.66■□□□□ 0.42
CCSMST1Q4G0I0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.66■□□□□ 0.42
CCSMST1Q4G0I0 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCSMST1Q4G0I0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCSMST1Q4G0I0 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCSMST1Q4G0I0 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.66■□□□□ 0.42
CCSMST1Q4G0I0 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.66■□□□□ 0.42
CCSMST1Q4G0I0 FAM86EP-206ENST00000510506 987 ntBASIC17.66■□□□□ 0.42
CCSMST1Q4G0I0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms