Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.98■□□□□ 0.15
CHRFAM7AQ494W8 OR6D1P-203ENST00000641209 4860 ntBASIC15.98■□□□□ 0.15
CHRFAM7AQ494W8 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
CHRFAM7AQ494W8 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CHRFAM7AQ494W8 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHRFAM7AQ494W8 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
CHRFAM7AQ494W8 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CHRFAM7AQ494W8 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CHRFAM7AQ494W8 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHRFAM7AQ494W8 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.98■□□□□ 0.15
CHRFAM7AQ494W8 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHRFAM7AQ494W8 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHRFAM7AQ494W8 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHRFAM7AQ494W8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHRFAM7AQ494W8 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CHRFAM7AQ494W8 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHRFAM7AQ494W8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 MFAP1P1-201ENST00000442257 1255 ntBASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 AC011298.2-201ENST00000617989 482 ntBASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 AC130371.2-201ENST00000619443 611 ntBASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 AC141257.4-201ENST00000634557 245 ntBASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 AC136944.6-201ENST00000634818 245 ntBASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 AC068880.1-201ENST00000507289 2297 ntBASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.97■□□□□ 0.15
CHRFAM7AQ494W8 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 AC140113.3-201ENST00000605663 199 ntBASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CHRFAM7AQ494W8 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
CHRFAM7AQ494W8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRFAM7AQ494W8 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
CHRFAM7AQ494W8 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRFAM7AQ494W8 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.95■□□□□ 0.14
CHRFAM7AQ494W8 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms