Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC14.22□□□□□ -0.13
CFHR3Q02985 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CFHR3Q02985 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CFHR3Q02985 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
CFHR3Q02985 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CFHR3Q02985 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CFHR3Q02985 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CFHR3Q02985 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CFHR3Q02985 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CFHR3Q02985 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC14.22□□□□□ -0.13
CFHR3Q02985 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.22□□□□□ -0.13
CFHR3Q02985 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CFHR3Q02985 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CFHR3Q02985 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CFHR3Q02985 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CFHR3Q02985 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CFHR3Q02985 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CFHR3Q02985 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CFHR3Q02985 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CFHR3Q02985 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CFHR3Q02985 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CFHR3Q02985 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CFHR3Q02985 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CFHR3Q02985 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.21□□□□□ -0.13
CFHR3Q02985 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.21□□□□□ -0.13
CFHR3Q02985 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.21□□□□□ -0.13
CFHR3Q02985 AC090616.6-201ENST00000582640 721 ntBASIC14.21□□□□□ -0.13
CFHR3Q02985 AC093458.2-201ENST00000623150 629 ntBASIC14.21□□□□□ -0.13
CFHR3Q02985 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CFHR3Q02985 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CFHR3Q02985 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CFHR3Q02985 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CFHR3Q02985 LINC00167-201ENST00000530583 1419 ntBASIC14.21□□□□□ -0.13
CFHR3Q02985 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CFHR3Q02985 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CFHR3Q02985 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CFHR3Q02985 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CFHR3Q02985 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CFHR3Q02985 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CFHR3Q02985 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CFHR3Q02985 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC14.2□□□□□ -0.14
CFHR3Q02985 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CFHR3Q02985 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CFHR3Q02985 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CFHR3Q02985 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CFHR3Q02985 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CFHR3Q02985 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CFHR3Q02985 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CFHR3Q02985 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.2□□□□□ -0.14
CFHR3Q02985 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CFHR3Q02985 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.2□□□□□ -0.14
CFHR3Q02985 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CFHR3Q02985 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
CFHR3Q02985 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.2□□□□□ -0.14
CFHR3Q02985 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.2□□□□□ -0.14
CFHR3Q02985 MIR3180-1-201ENST00000580374 94 ntBASIC14.2□□□□□ -0.14
CFHR3Q02985 MIR3180-3-201ENST00000584616 94 ntBASIC14.2□□□□□ -0.14
CFHR3Q02985 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.2□□□□□ -0.14
CFHR3Q02985 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.2□□□□□ -0.14
CFHR3Q02985 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CFHR3Q02985 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CFHR3Q02985 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CFHR3Q02985 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.2□□□□□ -0.14
CFHR3Q02985 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CFHR3Q02985 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CFHR3Q02985 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CFHR3Q02985 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CFHR3Q02985 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CFHR3Q02985 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CFHR3Q02985 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CFHR3Q02985 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CFHR3Q02985 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CFHR3Q02985 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CFHR3Q02985 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.2□□□□□ -0.14
CFHR3Q02985 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC14.2□□□□□ -0.14
CFHR3Q02985 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CFHR3Q02985 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CFHR3Q02985 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC14.19□□□□□ -0.14
CFHR3Q02985 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
CFHR3Q02985 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CFHR3Q02985 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.19□□□□□ -0.14
CFHR3Q02985 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CFHR3Q02985 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC14.19□□□□□ -0.14
CFHR3Q02985 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC14.19□□□□□ -0.14
CFHR3Q02985 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC14.19□□□□□ -0.14
CFHR3Q02985 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CFHR3Q02985 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CFHR3Q02985 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CFHR3Q02985 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CFHR3Q02985 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CFHR3Q02985 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CFHR3Q02985 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CFHR3Q02985 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CFHR3Q02985 RN7SL606P-201ENST00000472779 293 ntBASIC14.19□□□□□ -0.14
CFHR3Q02985 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.19□□□□□ -0.14
CFHR3Q02985 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CFHR3Q02985 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CFHR3Q02985 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CFHR3Q02985 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.19□□□□□ -0.14
CFHR3Q02985 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms