Protein–RNA interactions for Protein: P68366

TUBA4A, Tubulin alpha-4A chain, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4AP68366 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
TUBA4AP68366 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TUBA4AP68366 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA4AP68366 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA4AP68366 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA4AP68366 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA4AP68366 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA4AP68366 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA4AP68366 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA4AP68366 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA4AP68366 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA4AP68366 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TUBA4AP68366 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.11■□□□□ 0.33
TUBA4AP68366 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA4AP68366 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA4AP68366 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA4AP68366 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.11■□□□□ 0.33
TUBA4AP68366 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA4AP68366 KRT16P5-201ENST00000455284 522 ntBASIC17.11■□□□□ 0.33
TUBA4AP68366 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA4AP68366 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.11■□□□□ 0.33
TUBA4AP68366 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA4AP68366 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.11■□□□□ 0.33
TUBA4AP68366 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TUBA4AP68366 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA4AP68366 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA4AP68366 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TUBA4AP68366 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA4AP68366 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA4AP68366 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA4AP68366 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA4AP68366 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA4AP68366 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA4AP68366 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA4AP68366 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA4AP68366 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA4AP68366 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA4AP68366 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.11■□□□□ 0.33
TUBA4AP68366 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA4AP68366 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TUBA4AP68366 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.11■□□□□ 0.33
TUBA4AP68366 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA4AP68366 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA4AP68366 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA4AP68366 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA4AP68366 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA4AP68366 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA4AP68366 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
TUBA4AP68366 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA4AP68366 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA4AP68366 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA4AP68366 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA4AP68366 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA4AP68366 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA4AP68366 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA4AP68366 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA4AP68366 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA4AP68366 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA4AP68366 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA4AP68366 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA4AP68366 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA4AP68366 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.1■□□□□ 0.33
TUBA4AP68366 AC008550.1-201ENST00000511500 884 ntBASIC17.1■□□□□ 0.33
TUBA4AP68366 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA4AP68366 REXO1L9P-201ENST00000604264 2108 ntBASIC17.1■□□□□ 0.33
TUBA4AP68366 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.1■□□□□ 0.33
TUBA4AP68366 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.1■□□□□ 0.33
TUBA4AP68366 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA4AP68366 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA4AP68366 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA4AP68366 HTR7P1-201ENST00000538670 1336 ntBASIC17.1■□□□□ 0.33
TUBA4AP68366 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA4AP68366 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA4AP68366 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA4AP68366 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA4AP68366 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TUBA4AP68366 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA4AP68366 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA4AP68366 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.1■□□□□ 0.33
TUBA4AP68366 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA4AP68366 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TUBA4AP68366 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TUBA4AP68366 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA4AP68366 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA4AP68366 LINC00602-201ENST00000629776 2065 ntBASIC17.09■□□□□ 0.33
TUBA4AP68366 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA4AP68366 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA4AP68366 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA4AP68366 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA4AP68366 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA4AP68366 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.09■□□□□ 0.33
TUBA4AP68366 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA4AP68366 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.09■□□□□ 0.33
TUBA4AP68366 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TUBA4AP68366 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA4AP68366 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA4AP68366 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.09■□□□□ 0.33
TUBA4AP68366 TUBB8P6-201ENST00000436895 1288 ntBASIC17.09■□□□□ 0.33
TUBA4AP68366 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.09■□□□□ 0.33
TUBA4AP68366 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms