Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
CHMP4BP1P59074 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.81■□□□□ 0.92
CHMP4BP1P59074 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CHMP4BP1P59074 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CHMP4BP1P59074 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP4BP1P59074 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP4BP1P59074 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP4BP1P59074 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CHMP4BP1P59074 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CHMP4BP1P59074 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP4BP1P59074 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.8■□□□□ 0.92
CHMP4BP1P59074 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP4BP1P59074 PCDHB18P-201ENST00000524813 2368 ntBASIC20.8■□□□□ 0.92
CHMP4BP1P59074 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.8■□□□□ 0.92
CHMP4BP1P59074 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP4BP1P59074 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP4BP1P59074 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP4BP1P59074 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP4BP1P59074 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.8■□□□□ 0.92
CHMP4BP1P59074 AC246785.2-201ENST00000432512 513 ntBASIC20.8■□□□□ 0.92
CHMP4BP1P59074 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.8■□□□□ 0.92
CHMP4BP1P59074 LINC00265-3P-201ENST00000447588 903 ntBASIC20.8■□□□□ 0.92
CHMP4BP1P59074 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP4BP1P59074 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.8■□□□□ 0.92
CHMP4BP1P59074 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.8■□□□□ 0.92
CHMP4BP1P59074 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP4BP1P59074 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP4BP1P59074 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP4BP1P59074 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP4BP1P59074 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CHMP4BP1P59074 AL133373.2-201ENST00000623187 2828 ntBASIC20.8■□□□□ 0.92
CHMP4BP1P59074 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP4BP1P59074 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP4BP1P59074 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP4BP1P59074 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP4BP1P59074 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP4BP1P59074 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.79■□□□□ 0.92
CHMP4BP1P59074 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP4BP1P59074 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP4BP1P59074 AL161938.1-201ENST00000569833 2180 ntBASIC20.79■□□□□ 0.92
CHMP4BP1P59074 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
CHMP4BP1P59074 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP4BP1P59074 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
CHMP4BP1P59074 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.79■□□□□ 0.92
CHMP4BP1P59074 CHCHD2P8-201ENST00000429873 447 ntBASIC20.79■□□□□ 0.92
CHMP4BP1P59074 HLA-F-220ENST00000434407 884 ntBASIC20.79■□□□□ 0.92
CHMP4BP1P59074 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.79■□□□□ 0.92
CHMP4BP1P59074 UNC93B7-201ENST00000509439 705 ntBASIC20.79■□□□□ 0.92
CHMP4BP1P59074 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.79■□□□□ 0.92
CHMP4BP1P59074 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.79■□□□□ 0.92
CHMP4BP1P59074 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
CHMP4BP1P59074 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.79■□□□□ 0.92
CHMP4BP1P59074 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.79■□□□□ 0.92
CHMP4BP1P59074 AC010240.3-201ENST00000607688 395 ntBASIC20.79■□□□□ 0.92
CHMP4BP1P59074 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.79■□□□□ 0.92
CHMP4BP1P59074 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP4BP1P59074 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.79■□□□□ 0.92
CHMP4BP1P59074 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.79■□□□□ 0.92
CHMP4BP1P59074 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP4BP1P59074 AL109659.2-201ENST00000606809 1674 ntBASIC20.79■□□□□ 0.92
CHMP4BP1P59074 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CHMP4BP1P59074 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CHMP4BP1P59074 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP4BP1P59074 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CHMP4BP1P59074 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP4BP1P59074 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CHMP4BP1P59074 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP4BP1P59074 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP4BP1P59074 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP4BP1P59074 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP4BP1P59074 AC006333.2-201ENST00000607957 2099 ntBASIC20.78■□□□□ 0.92
CHMP4BP1P59074 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP4BP1P59074 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP4BP1P59074 AC093525.10-201ENST00000625130 1569 ntBASIC20.78■□□□□ 0.92
CHMP4BP1P59074 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP4BP1P59074 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP4BP1P59074 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP4BP1P59074 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP4BP1P59074 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP4BP1P59074 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.78■□□□□ 0.92
CHMP4BP1P59074 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP4BP1P59074 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP4BP1P59074 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP4BP1P59074 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP4BP1P59074 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.78■□□□□ 0.92
CHMP4BP1P59074 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.78■□□□□ 0.92
CHMP4BP1P59074 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.78■□□□□ 0.92
CHMP4BP1P59074 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CHMP4BP1P59074 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP4BP1P59074 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP4BP1P59074 IRX1P1-201ENST00000438849 1838 ntBASIC20.78■□□□□ 0.92
CHMP4BP1P59074 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CHMP4BP1P59074 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP4BP1P59074 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.78■□□□□ 0.92
CHMP4BP1P59074 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.78■□□□□ 0.92
CHMP4BP1P59074 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.78■□□□□ 0.92
CHMP4BP1P59074 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CHMP4BP1P59074 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.77■□□□□ 0.92
CHMP4BP1P59074 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP4BP1P59074 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms