Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
NCKAP1LP55160 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
NCKAP1LP55160 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NCKAP1LP55160 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NCKAP1LP55160 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.92■□□□□ 0.78
NCKAP1LP55160 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCKAP1LP55160 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCKAP1LP55160 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCKAP1LP55160 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCKAP1LP55160 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.92■□□□□ 0.78
NCKAP1LP55160 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NCKAP1LP55160 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.92■□□□□ 0.78
NCKAP1LP55160 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCKAP1LP55160 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.92■□□□□ 0.78
NCKAP1LP55160 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.92■□□□□ 0.78
NCKAP1LP55160 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCKAP1LP55160 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
NCKAP1LP55160 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
NCKAP1LP55160 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.92■□□□□ 0.78
NCKAP1LP55160 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCKAP1LP55160 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
NCKAP1LP55160 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.92■□□□□ 0.78
NCKAP1LP55160 NEFHP1-201ENST00000412845 2629 ntBASIC19.92■□□□□ 0.78
NCKAP1LP55160 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NCKAP1LP55160 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCKAP1LP55160 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.92■□□□□ 0.78
NCKAP1LP55160 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCKAP1LP55160 AC016734.2-201ENST00000624325 1377 ntBASIC19.92■□□□□ 0.78
NCKAP1LP55160 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NCKAP1LP55160 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCKAP1LP55160 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.92■□□□□ 0.78
NCKAP1LP55160 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCKAP1LP55160 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCKAP1LP55160 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCKAP1LP55160 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.91■□□□□ 0.78
NCKAP1LP55160 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.91■□□□□ 0.78
NCKAP1LP55160 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.91■□□□□ 0.78
NCKAP1LP55160 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
NCKAP1LP55160 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCKAP1LP55160 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.91■□□□□ 0.78
NCKAP1LP55160 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.91■□□□□ 0.78
NCKAP1LP55160 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.91■□□□□ 0.78
NCKAP1LP55160 AL121672.3-201ENST00000608644 468 ntBASIC19.91■□□□□ 0.78
NCKAP1LP55160 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.91■□□□□ 0.78
NCKAP1LP55160 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCKAP1LP55160 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCKAP1LP55160 REXO1L9P-201ENST00000604264 2108 ntBASIC19.91■□□□□ 0.78
NCKAP1LP55160 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.91■□□□□ 0.78
NCKAP1LP55160 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCKAP1LP55160 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NCKAP1LP55160 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NCKAP1LP55160 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCKAP1LP55160 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.9■□□□□ 0.78
NCKAP1LP55160 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCKAP1LP55160 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
NCKAP1LP55160 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCKAP1LP55160 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCKAP1LP55160 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.9■□□□□ 0.78
NCKAP1LP55160 KRT18P65-201ENST00000439811 1286 ntBASIC19.9■□□□□ 0.78
NCKAP1LP55160 BX276092.5-203ENST00000456199 560 ntBASIC19.9■□□□□ 0.78
NCKAP1LP55160 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCKAP1LP55160 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NCKAP1LP55160 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.9■□□□□ 0.78
NCKAP1LP55160 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.9■□□□□ 0.78
NCKAP1LP55160 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCKAP1LP55160 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
NCKAP1LP55160 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NCKAP1LP55160 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
NCKAP1LP55160 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
NCKAP1LP55160 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.9■□□□□ 0.78
NCKAP1LP55160 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCKAP1LP55160 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCKAP1LP55160 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCKAP1LP55160 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
NCKAP1LP55160 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.9■□□□□ 0.78
NCKAP1LP55160 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCKAP1LP55160 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCKAP1LP55160 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCKAP1LP55160 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.89■□□□□ 0.78
NCKAP1LP55160 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
NCKAP1LP55160 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NCKAP1LP55160 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
NCKAP1LP55160 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NCKAP1LP55160 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NCKAP1LP55160 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NCKAP1LP55160 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.89■□□□□ 0.77
NCKAP1LP55160 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NCKAP1LP55160 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NCKAP1LP55160 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.89■□□□□ 0.77
NCKAP1LP55160 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NCKAP1LP55160 DUTP2-201ENST00000519164 463 ntBASIC19.89■□□□□ 0.77
NCKAP1LP55160 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NCKAP1LP55160 AC009154.2-201ENST00000621177 724 ntBASIC19.89■□□□□ 0.77
NCKAP1LP55160 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NCKAP1LP55160 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.89■□□□□ 0.77
NCKAP1LP55160 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NCKAP1LP55160 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
NCKAP1LP55160 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCKAP1LP55160 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NCKAP1LP55160 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms