Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HMGCS2P54868 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HMGCS2P54868 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HMGCS2P54868 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.98■□□□□ 0.95
HMGCS2P54868 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HMGCS2P54868 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.98■□□□□ 0.95
HMGCS2P54868 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.98■□□□□ 0.95
HMGCS2P54868 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HMGCS2P54868 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
HMGCS2P54868 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.98■□□□□ 0.95
HMGCS2P54868 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HMGCS2P54868 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
HMGCS2P54868 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HMGCS2P54868 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HMGCS2P54868 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HMGCS2P54868 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.98■□□□□ 0.95
HMGCS2P54868 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HMGCS2P54868 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.97■□□□□ 0.95
HMGCS2P54868 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HMGCS2P54868 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HMGCS2P54868 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
HMGCS2P54868 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HMGCS2P54868 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.97■□□□□ 0.95
HMGCS2P54868 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.97■□□□□ 0.95
HMGCS2P54868 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HMGCS2P54868 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.97■□□□□ 0.95
HMGCS2P54868 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.97■□□□□ 0.95
HMGCS2P54868 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.97■□□□□ 0.95
HMGCS2P54868 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HMGCS2P54868 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.97■□□□□ 0.95
HMGCS2P54868 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.97■□□□□ 0.95
HMGCS2P54868 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
HMGCS2P54868 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.97■□□□□ 0.95
HMGCS2P54868 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
HMGCS2P54868 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
HMGCS2P54868 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HMGCS2P54868 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
HMGCS2P54868 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
HMGCS2P54868 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.97■□□□□ 0.95
HMGCS2P54868 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.97■□□□□ 0.95
HMGCS2P54868 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.97■□□□□ 0.95
HMGCS2P54868 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
HMGCS2P54868 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HMGCS2P54868 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HMGCS2P54868 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HMGCS2P54868 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
HMGCS2P54868 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HMGCS2P54868 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HMGCS2P54868 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.96■□□□□ 0.95
HMGCS2P54868 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
HMGCS2P54868 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
HMGCS2P54868 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.96■□□□□ 0.95
HMGCS2P54868 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HMGCS2P54868 MIR1233-2-201ENST00000408138 82 ntBASIC20.96■□□□□ 0.95
HMGCS2P54868 MIR1233-1-201ENST00000408722 82 ntBASIC20.96■□□□□ 0.95
HMGCS2P54868 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.96■□□□□ 0.95
HMGCS2P54868 AC112698.1-201ENST00000510299 916 ntBASIC20.96■□□□□ 0.95
HMGCS2P54868 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.96■□□□□ 0.95
HMGCS2P54868 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.96■□□□□ 0.95
HMGCS2P54868 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
HMGCS2P54868 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HMGCS2P54868 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HMGCS2P54868 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HMGCS2P54868 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.96■□□□□ 0.95
HMGCS2P54868 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HMGCS2P54868 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HMGCS2P54868 AL356309.3-201ENST00000624132 1934 ntBASIC20.96■□□□□ 0.95
HMGCS2P54868 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HMGCS2P54868 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
HMGCS2P54868 AC104109.2-201ENST00000602919 1418 ntBASIC20.95■□□□□ 0.95
HMGCS2P54868 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.95■□□□□ 0.94
HMGCS2P54868 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
HMGCS2P54868 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.95■□□□□ 0.94
HMGCS2P54868 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
HMGCS2P54868 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
HMGCS2P54868 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HMGCS2P54868 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HMGCS2P54868 BX842568.4-201ENST00000421222 227 ntBASIC20.95■□□□□ 0.94
HMGCS2P54868 IGHV3-22-201ENST00000520721 359 ntBASIC20.95■□□□□ 0.94
HMGCS2P54868 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
HMGCS2P54868 AC012640.2-201ENST00000561606 901 ntBASIC20.95■□□□□ 0.94
HMGCS2P54868 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.95■□□□□ 0.94
HMGCS2P54868 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.95■□□□□ 0.94
HMGCS2P54868 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
HMGCS2P54868 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
HMGCS2P54868 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.95■□□□□ 0.94
HMGCS2P54868 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HMGCS2P54868 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
HMGCS2P54868 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HMGCS2P54868 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
HMGCS2P54868 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.95■□□□□ 0.94
HMGCS2P54868 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
HMGCS2P54868 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMGCS2P54868 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.94■□□□□ 0.94
HMGCS2P54868 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HMGCS2P54868 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMGCS2P54868 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMGCS2P54868 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.94■□□□□ 0.94
HMGCS2P54868 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.94■□□□□ 0.94
HMGCS2P54868 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms