Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.47■□□□□ 0.71
RAD23BP54727 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
RAD23BP54727 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RAD23BP54727 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAD23BP54727 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAD23BP54727 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAD23BP54727 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
RAD23BP54727 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAD23BP54727 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RAD23BP54727 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.47■□□□□ 0.71
RAD23BP54727 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RAD23BP54727 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAD23BP54727 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAD23BP54727 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.46■□□□□ 0.71
RAD23BP54727 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.46■□□□□ 0.71
RAD23BP54727 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RAD23BP54727 AL162741.1-201ENST00000565563 1558 ntBASIC19.46■□□□□ 0.71
RAD23BP54727 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
RAD23BP54727 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAD23BP54727 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAD23BP54727 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAD23BP54727 AL031133.1-201ENST00000406807 723 ntBASIC19.46■□□□□ 0.71
RAD23BP54727 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAD23BP54727 VENTXP5-201ENST00000523979 775 ntBASIC19.46■□□□□ 0.71
RAD23BP54727 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAD23BP54727 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
RAD23BP54727 AL590326.2-201ENST00000625139 305 ntBASIC19.46■□□□□ 0.71
RAD23BP54727 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAD23BP54727 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAD23BP54727 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAD23BP54727 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAD23BP54727 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.46■□□□□ 0.71
RAD23BP54727 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.46■□□□□ 0.71
RAD23BP54727 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.46■□□□□ 0.71
RAD23BP54727 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.46■□□□□ 0.71
RAD23BP54727 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAD23BP54727 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAD23BP54727 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAD23BP54727 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAD23BP54727 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAD23BP54727 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.45■□□□□ 0.7
RAD23BP54727 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAD23BP54727 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAD23BP54727 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RAD23BP54727 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAD23BP54727 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAD23BP54727 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAD23BP54727 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAD23BP54727 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAD23BP54727 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAD23BP54727 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.45■□□□□ 0.7
RAD23BP54727 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.45■□□□□ 0.7
RAD23BP54727 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.45■□□□□ 0.7
RAD23BP54727 AC010331.1-201ENST00000611423 582 ntBASIC19.45■□□□□ 0.7
RAD23BP54727 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.45■□□□□ 0.7
RAD23BP54727 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
RAD23BP54727 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.45■□□□□ 0.7
RAD23BP54727 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAD23BP54727 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.45■□□□□ 0.7
RAD23BP54727 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RAD23BP54727 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.45■□□□□ 0.7
RAD23BP54727 PHGDH-209ENST00000641074 1780 ntBASIC19.44■□□□□ 0.7
RAD23BP54727 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RAD23BP54727 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAD23BP54727 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAD23BP54727 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RAD23BP54727 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAD23BP54727 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAD23BP54727 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.44■□□□□ 0.7
RAD23BP54727 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAD23BP54727 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAD23BP54727 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAD23BP54727 MIR1224-201ENST00000408193 85 ntBASIC19.44■□□□□ 0.7
RAD23BP54727 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAD23BP54727 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
RAD23BP54727 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.44■□□□□ 0.7
RAD23BP54727 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
RAD23BP54727 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
RAD23BP54727 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAD23BP54727 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAD23BP54727 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAD23BP54727 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RAD23BP54727 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAD23BP54727 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.44■□□□□ 0.7
RAD23BP54727 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
RAD23BP54727 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RAD23BP54727 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
RAD23BP54727 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RAD23BP54727 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAD23BP54727 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.43■□□□□ 0.7
RAD23BP54727 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAD23BP54727 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAD23BP54727 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.43■□□□□ 0.7
RAD23BP54727 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAD23BP54727 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.43■□□□□ 0.7
RAD23BP54727 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAD23BP54727 AC135050.7-201ENST00000624508 2218 ntBASIC19.43■□□□□ 0.7
RAD23BP54727 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAD23BP54727 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.43■□□□□ 0.7
RAD23BP54727 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms