Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PDX1P52945 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
PDX1P52945 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDX1P52945 AC024563.2-201ENST00000603282 481 ntBASIC17.68■□□□□ 0.42
PDX1P52945 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDX1P52945 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PDX1P52945 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDX1P52945 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PDX1P52945 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDX1P52945 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDX1P52945 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDX1P52945 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
PDX1P52945 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PDX1P52945 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDX1P52945 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDX1P52945 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDX1P52945 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDX1P52945 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDX1P52945 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDX1P52945 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDX1P52945 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDX1P52945 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDX1P52945 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDX1P52945 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDX1P52945 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDX1P52945 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.67■□□□□ 0.42
PDX1P52945 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
PDX1P52945 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.67■□□□□ 0.42
PDX1P52945 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.67■□□□□ 0.42
PDX1P52945 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDX1P52945 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.67■□□□□ 0.42
PDX1P52945 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.67■□□□□ 0.42
PDX1P52945 AC124864.1-201ENST00000623408 392 ntBASIC17.67■□□□□ 0.42
PDX1P52945 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.67■□□□□ 0.42
PDX1P52945 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.67■□□□□ 0.42
PDX1P52945 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDX1P52945 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDX1P52945 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.67■□□□□ 0.42
PDX1P52945 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDX1P52945 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PDX1P52945 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PDX1P52945 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDX1P52945 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDX1P52945 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PDX1P52945 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PDX1P52945 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDX1P52945 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDX1P52945 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDX1P52945 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDX1P52945 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PDX1P52945 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PDX1P52945 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDX1P52945 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDX1P52945 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDX1P52945 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.66■□□□□ 0.42
PDX1P52945 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PDX1P52945 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDX1P52945 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDX1P52945 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.66■□□□□ 0.42
PDX1P52945 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.66■□□□□ 0.42
PDX1P52945 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.66■□□□□ 0.42
PDX1P52945 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.66■□□□□ 0.42
PDX1P52945 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.66■□□□□ 0.42
PDX1P52945 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PDX1P52945 AC023511.2-201ENST00000618803 211 ntBASIC17.66■□□□□ 0.42
PDX1P52945 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.66■□□□□ 0.42
PDX1P52945 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDX1P52945 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.66■□□□□ 0.42
PDX1P52945 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PDX1P52945 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDX1P52945 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.66■□□□□ 0.42
PDX1P52945 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDX1P52945 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDX1P52945 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDX1P52945 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.66■□□□□ 0.42
PDX1P52945 NSUN5P1-202ENST00000421140 1535 ntBASIC17.66■□□□□ 0.42
PDX1P52945 NSUN5P2-203ENST00000457352 1529 ntBASIC17.66■□□□□ 0.42
PDX1P52945 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDX1P52945 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
PDX1P52945 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDX1P52945 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PDX1P52945 Z98044.1-201ENST00000632503 1764 ntBASIC17.66■□□□□ 0.42
PDX1P52945 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.66■□□□□ 0.42
PDX1P52945 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.66■□□□□ 0.42
PDX1P52945 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PDX1P52945 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.65■□□□□ 0.42
PDX1P52945 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDX1P52945 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDX1P52945 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDX1P52945 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDX1P52945 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDX1P52945 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
PDX1P52945 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDX1P52945 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDX1P52945 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
PDX1P52945 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDX1P52945 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.65■□□□□ 0.42
PDX1P52945 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDX1P52945 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDX1P52945 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms