Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.58■□□□□ 0.4
SLC6A12P48065 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.58■□□□□ 0.4
SLC6A12P48065 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC6A12P48065 AC113404.2-201ENST00000507884 177 ntBASIC17.58■□□□□ 0.4
SLC6A12P48065 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.58■□□□□ 0.4
SLC6A12P48065 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
SLC6A12P48065 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC6A12P48065 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC6A12P48065 AL136038.4-201ENST00000603606 1261 ntBASIC17.58■□□□□ 0.4
SLC6A12P48065 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC6A12P48065 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC6A12P48065 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC6A12P48065 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.58■□□□□ 0.4
SLC6A12P48065 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC6A12P48065 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC6A12P48065 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC6A12P48065 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC6A12P48065 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC6A12P48065 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.58■□□□□ 0.4
SLC6A12P48065 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC6A12P48065 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SLC6A12P48065 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC6A12P48065 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC6A12P48065 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SLC6A12P48065 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC6A12P48065 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC6A12P48065 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC6A12P48065 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC6A12P48065 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC6A12P48065 KRT89P-201ENST00000620027 1478 ntBASIC17.57■□□□□ 0.4
SLC6A12P48065 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC6A12P48065 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC6A12P48065 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC6A12P48065 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
SLC6A12P48065 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC6A12P48065 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC6A12P48065 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SLC6A12P48065 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
SLC6A12P48065 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC6A12P48065 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC6A12P48065 HLA-F-220ENST00000434407 884 ntBASIC17.57■□□□□ 0.4
SLC6A12P48065 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC6A12P48065 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.57■□□□□ 0.4
SLC6A12P48065 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
SLC6A12P48065 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC6A12P48065 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.57■□□□□ 0.4
SLC6A12P48065 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC6A12P48065 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC6A12P48065 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC6A12P48065 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC6A12P48065 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SLC6A12P48065 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC6A12P48065 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC6A12P48065 KRT18P55-202ENST00000578578 1546 ntBASIC17.57■□□□□ 0.4
SLC6A12P48065 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.57■□□□□ 0.4
SLC6A12P48065 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC6A12P48065 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC6A12P48065 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC6A12P48065 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SLC6A12P48065 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SLC6A12P48065 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC6A12P48065 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC6A12P48065 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC6A12P48065 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC6A12P48065 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC6A12P48065 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC6A12P48065 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.56■□□□□ 0.4
SLC6A12P48065 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC6A12P48065 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC6A12P48065 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC6A12P48065 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC6A12P48065 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SLC6A12P48065 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC6A12P48065 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC6A12P48065 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC6A12P48065 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC6A12P48065 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC6A12P48065 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC6A12P48065 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SLC6A12P48065 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SLC6A12P48065 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.56■□□□□ 0.4
SLC6A12P48065 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC6A12P48065 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.56■□□□□ 0.4
SLC6A12P48065 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC6A12P48065 AC024563.2-201ENST00000603282 481 ntBASIC17.56■□□□□ 0.4
SLC6A12P48065 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SLC6A12P48065 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC6A12P48065 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC6A12P48065 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SLC6A12P48065 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC6A12P48065 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC6A12P48065 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC6A12P48065 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC6A12P48065 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC6A12P48065 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC6A12P48065 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC6A12P48065 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SLC6A12P48065 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SLC6A12P48065 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC6A12P48065 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms