Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CEACAM3P40198 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CEACAM3P40198 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CEACAM3P40198 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CEACAM3P40198 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.88□□□□□ -0.03
CEACAM3P40198 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC14.88□□□□□ -0.03
CEACAM3P40198 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CEACAM3P40198 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CEACAM3P40198 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CEACAM3P40198 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.88□□□□□ -0.03
CEACAM3P40198 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CEACAM3P40198 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CEACAM3P40198 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.88□□□□□ -0.03
CEACAM3P40198 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CEACAM3P40198 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC14.88□□□□□ -0.03
CEACAM3P40198 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CEACAM3P40198 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CEACAM3P40198 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CEACAM3P40198 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CEACAM3P40198 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CEACAM3P40198 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC14.87□□□□□ -0.03
CEACAM3P40198 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CEACAM3P40198 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CEACAM3P40198 CROCCP1-201ENST00000426910 5675 ntBASIC14.87□□□□□ -0.03
CEACAM3P40198 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC14.87□□□□□ -0.03
CEACAM3P40198 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CEACAM3P40198 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.87□□□□□ -0.03
CEACAM3P40198 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CEACAM3P40198 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC14.87□□□□□ -0.03
CEACAM3P40198 AL359075.1-203ENST00000462729 1002 ntBASIC14.87□□□□□ -0.03
CEACAM3P40198 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.87□□□□□ -0.03
CEACAM3P40198 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CEACAM3P40198 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
CEACAM3P40198 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.87□□□□□ -0.03
CEACAM3P40198 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC14.87□□□□□ -0.03
CEACAM3P40198 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CEACAM3P40198 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.87□□□□□ -0.03
CEACAM3P40198 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CEACAM3P40198 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CEACAM3P40198 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC14.87□□□□□ -0.03
CEACAM3P40198 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CEACAM3P40198 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CEACAM3P40198 USP49-202ENST00000373010 2446 ntTSL 5 BASIC14.87□□□□□ -0.03
CEACAM3P40198 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
CEACAM3P40198 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CEACAM3P40198 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC14.87□□□□□ -0.03
CEACAM3P40198 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC14.87□□□□□ -0.03
CEACAM3P40198 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
CEACAM3P40198 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CEACAM3P40198 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CEACAM3P40198 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC14.87□□□□□ -0.03
CEACAM3P40198 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.87□□□□□ -0.03
CEACAM3P40198 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC14.87□□□□□ -0.03
CEACAM3P40198 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CEACAM3P40198 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CEACAM3P40198 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CEACAM3P40198 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CEACAM3P40198 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CEACAM3P40198 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CEACAM3P40198 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CEACAM3P40198 AC005082.1-201ENST00000413042 2259 ntBASIC14.86□□□□□ -0.03
CEACAM3P40198 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC14.86□□□□□ -0.03
CEACAM3P40198 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.86□□□□□ -0.03
CEACAM3P40198 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CEACAM3P40198 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CEACAM3P40198 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CEACAM3P40198 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CEACAM3P40198 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.86□□□□□ -0.03
CEACAM3P40198 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CEACAM3P40198 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.86□□□□□ -0.03
CEACAM3P40198 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CEACAM3P40198 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CEACAM3P40198 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.86□□□□□ -0.03
CEACAM3P40198 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.86□□□□□ -0.03
CEACAM3P40198 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.86□□□□□ -0.03
CEACAM3P40198 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.86□□□□□ -0.03
CEACAM3P40198 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.86□□□□□ -0.03
CEACAM3P40198 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
CEACAM3P40198 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CEACAM3P40198 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CEACAM3P40198 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CEACAM3P40198 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CEACAM3P40198 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CEACAM3P40198 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CEACAM3P40198 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.86□□□□□ -0.03
CEACAM3P40198 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CEACAM3P40198 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CEACAM3P40198 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CEACAM3P40198 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC14.86□□□□□ -0.03
CEACAM3P40198 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC14.86□□□□□ -0.03
CEACAM3P40198 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CEACAM3P40198 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CEACAM3P40198 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CEACAM3P40198 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.85□□□□□ -0.03
CEACAM3P40198 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CEACAM3P40198 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CEACAM3P40198 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CEACAM3P40198 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CEACAM3P40198 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CEACAM3P40198 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms