Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN1P35523 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN1P35523 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
CLCN1P35523 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.76■□□□□ 0.91
CLCN1P35523 AC104417.2-201ENST00000562989 1793 ntBASIC20.76■□□□□ 0.91
CLCN1P35523 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.76■□□□□ 0.91
CLCN1P35523 AGK-211ENST00000629555 2765 ntTSL 5 BASIC20.76■□□□□ 0.91
CLCN1P35523 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN1P35523 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.76■□□□□ 0.91
CLCN1P35523 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
CLCN1P35523 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CLCN1P35523 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.76■□□□□ 0.91
CLCN1P35523 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN1P35523 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN1P35523 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CLCN1P35523 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN1P35523 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CLCN1P35523 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CLCN1P35523 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.75■□□□□ 0.91
CLCN1P35523 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CLCN1P35523 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN1P35523 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN1P35523 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN1P35523 AC093677.2-201ENST00000600169 1863 ntBASIC20.75■□□□□ 0.91
CLCN1P35523 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.75■□□□□ 0.91
CLCN1P35523 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN1P35523 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN1P35523 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN1P35523 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
CLCN1P35523 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN1P35523 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN1P35523 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.75■□□□□ 0.91
CLCN1P35523 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN1P35523 ESRRAP1-201ENST00000400596 1257 ntBASIC20.75■□□□□ 0.91
CLCN1P35523 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.75■□□□□ 0.91
CLCN1P35523 TUBB8P6-201ENST00000436895 1288 ntBASIC20.75■□□□□ 0.91
CLCN1P35523 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.75■□□□□ 0.91
CLCN1P35523 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN1P35523 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.75■□□□□ 0.91
CLCN1P35523 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CLCN1P35523 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.75■□□□□ 0.91
CLCN1P35523 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CLCN1P35523 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN1P35523 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN1P35523 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLCN1P35523 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLCN1P35523 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLCN1P35523 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLCN1P35523 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC20.74■□□□□ 0.91
CLCN1P35523 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLCN1P35523 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLCN1P35523 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CLCN1P35523 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
CLCN1P35523 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLCN1P35523 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLCN1P35523 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.74■□□□□ 0.91
CLCN1P35523 FUK-207ENST00000571514 3054 ntTSL 2 BASIC20.74■□□□□ 0.91
CLCN1P35523 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC20.74■□□□□ 0.91
CLCN1P35523 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLCN1P35523 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CLCN1P35523 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC20.74■□□□□ 0.91
CLCN1P35523 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CLCN1P35523 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLCN1P35523 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.74■□□□□ 0.91
CLCN1P35523 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC20.74■□□□□ 0.91
CLCN1P35523 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLCN1P35523 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CLCN1P35523 BCL2-203ENST00000589955 5011 ntBASIC20.73■□□□□ 0.91
CLCN1P35523 AC008741.2-201ENST00000612792 3115 ntBASIC20.73■□□□□ 0.91
CLCN1P35523 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC20.73■□□□□ 0.91
CLCN1P35523 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN1P35523 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN1P35523 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN1P35523 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CLCN1P35523 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.73■□□□□ 0.91
CLCN1P35523 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CLCN1P35523 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN1P35523 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CLCN1P35523 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN1P35523 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN1P35523 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN1P35523 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN1P35523 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN1P35523 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.73■□□□□ 0.91
CLCN1P35523 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN1P35523 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN1P35523 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.73■□□□□ 0.91
CLCN1P35523 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.73■□□□□ 0.91
CLCN1P35523 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.73■□□□□ 0.91
CLCN1P35523 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.73■□□□□ 0.91
CLCN1P35523 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN1P35523 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.73■□□□□ 0.91
CLCN1P35523 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.73■□□□□ 0.91
CLCN1P35523 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN1P35523 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN1P35523 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.73■□□□□ 0.91
CLCN1P35523 SDHAP1-207ENST00000440850 2000 ntBASIC20.73■□□□□ 0.91
CLCN1P35523 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN1P35523 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.73■□□□□ 0.91
CLCN1P35523 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms