Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AP000550.4-202ENST00000639755 178 ntBASIC16.78■□□□□ 0.28
ABCD3P28288 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.78■□□□□ 0.28
ABCD3P28288 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ABCD3P28288 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ABCD3P28288 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ABCD3P28288 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ABCD3P28288 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
ABCD3P28288 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ABCD3P28288 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ABCD3P28288 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ABCD3P28288 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ABCD3P28288 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ABCD3P28288 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.78■□□□□ 0.28
ABCD3P28288 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ABCD3P28288 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ABCD3P28288 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.78■□□□□ 0.28
ABCD3P28288 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.78■□□□□ 0.28
ABCD3P28288 AC093677.2-201ENST00000600169 1863 ntBASIC16.78■□□□□ 0.28
ABCD3P28288 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ABCD3P28288 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ABCD3P28288 IER3-202ENST00000376377 1350 ntBASIC16.77■□□□□ 0.28
ABCD3P28288 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.77■□□□□ 0.28
ABCD3P28288 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
ABCD3P28288 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
ABCD3P28288 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ABCD3P28288 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.77■□□□□ 0.28
ABCD3P28288 PHGDH-209ENST00000641074 1780 ntBASIC16.77■□□□□ 0.28
ABCD3P28288 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.77■□□□□ 0.28
ABCD3P28288 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
ABCD3P28288 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ABCD3P28288 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
ABCD3P28288 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ABCD3P28288 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ABCD3P28288 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.77■□□□□ 0.28
ABCD3P28288 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.77■□□□□ 0.28
ABCD3P28288 IGHGP-201ENST00000390555 1178 ntBASIC16.77■□□□□ 0.28
ABCD3P28288 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.77■□□□□ 0.28
ABCD3P28288 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
ABCD3P28288 AC113404.2-201ENST00000507884 177 ntBASIC16.77■□□□□ 0.28
ABCD3P28288 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.77■□□□□ 0.28
ABCD3P28288 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.77■□□□□ 0.28
ABCD3P28288 RNF126P1-202ENST00000569893 925 ntBASIC16.77■□□□□ 0.28
ABCD3P28288 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.77■□□□□ 0.28
ABCD3P28288 AC011498.5-201ENST00000592027 486 ntBASIC16.77■□□□□ 0.28
ABCD3P28288 AC091076.1-201ENST00000610741 619 ntBASIC16.77■□□□□ 0.28
ABCD3P28288 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
ABCD3P28288 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.77■□□□□ 0.28
ABCD3P28288 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ABCD3P28288 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
ABCD3P28288 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ABCD3P28288 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ABCD3P28288 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
ABCD3P28288 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ABCD3P28288 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ABCD3P28288 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.77■□□□□ 0.27
ABCD3P28288 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
ABCD3P28288 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
ABCD3P28288 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ABCD3P28288 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ABCD3P28288 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ABCD3P28288 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ABCD3P28288 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ABCD3P28288 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ABCD3P28288 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ABCD3P28288 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ABCD3P28288 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
ABCD3P28288 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ABCD3P28288 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ABCD3P28288 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.76■□□□□ 0.27
ABCD3P28288 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ABCD3P28288 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.76■□□□□ 0.27
ABCD3P28288 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.76■□□□□ 0.27
ABCD3P28288 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.76■□□□□ 0.27
ABCD3P28288 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.76■□□□□ 0.27
ABCD3P28288 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.76■□□□□ 0.27
ABCD3P28288 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.76■□□□□ 0.27
ABCD3P28288 AC005332.3-201ENST00000589904 676 ntBASIC16.76■□□□□ 0.27
ABCD3P28288 GPR32P1-201ENST00000601788 811 ntBASIC16.76■□□□□ 0.27
ABCD3P28288 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
ABCD3P28288 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ABCD3P28288 Z83836.1-201ENST00000624605 1642 ntBASIC16.76■□□□□ 0.27
ABCD3P28288 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
ABCD3P28288 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ABCD3P28288 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ABCD3P28288 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
ABCD3P28288 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.76■□□□□ 0.27
ABCD3P28288 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
ABCD3P28288 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ABCD3P28288 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ABCD3P28288 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ABCD3P28288 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ABCD3P28288 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ABCD3P28288 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ABCD3P28288 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ABCD3P28288 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ABCD3P28288 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
ABCD3P28288 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.75■□□□□ 0.27
ABCD3P28288 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.75■□□□□ 0.27
ABCD3P28288 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
ABCD3P28288 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms