Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VARSP26640 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VARSP26640 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
VARSP26640 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
VARSP26640 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VARSP26640 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VARSP26640 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VARSP26640 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
VARSP26640 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
VARSP26640 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VARSP26640 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.91■□□□□ 0.46
VARSP26640 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.91■□□□□ 0.46
VARSP26640 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
VARSP26640 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VARSP26640 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VARSP26640 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.91■□□□□ 0.46
VARSP26640 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VARSP26640 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.91■□□□□ 0.46
VARSP26640 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.91■□□□□ 0.46
VARSP26640 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VARSP26640 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.91■□□□□ 0.46
VARSP26640 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
VARSP26640 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
VARSP26640 FAM87A-204ENST00000613235 858 ntBASIC17.91■□□□□ 0.46
VARSP26640 AC010653.2-201ENST00000623505 997 ntBASIC17.91■□□□□ 0.46
VARSP26640 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VARSP26640 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
VARSP26640 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
VARSP26640 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VARSP26640 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VARSP26640 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VARSP26640 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VARSP26640 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.91■□□□□ 0.46
VARSP26640 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VARSP26640 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.91■□□□□ 0.46
VARSP26640 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
VARSP26640 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
VARSP26640 AC099343.3-201ENST00000605834 2503 ntBASIC17.91■□□□□ 0.46
VARSP26640 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
VARSP26640 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.91■□□□□ 0.46
VARSP26640 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.91■□□□□ 0.46
VARSP26640 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VARSP26640 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VARSP26640 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.9■□□□□ 0.46
VARSP26640 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VARSP26640 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VARSP26640 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VARSP26640 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VARSP26640 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.9■□□□□ 0.46
VARSP26640 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.9■□□□□ 0.46
VARSP26640 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.9■□□□□ 0.46
VARSP26640 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VARSP26640 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VARSP26640 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VARSP26640 AK4P3-201ENST00000418260 669 ntBASIC17.9■□□□□ 0.46
VARSP26640 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VARSP26640 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VARSP26640 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.9■□□□□ 0.46
VARSP26640 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VARSP26640 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
VARSP26640 AC009053.2-201ENST00000563701 2365 ntBASIC17.9■□□□□ 0.46
VARSP26640 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VARSP26640 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VARSP26640 AC034236.2-201ENST00000606662 1610 ntBASIC17.9■□□□□ 0.46
VARSP26640 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VARSP26640 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VARSP26640 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VARSP26640 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VARSP26640 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.89■□□□□ 0.45
VARSP26640 AC124067.4-201ENST00000519691 2379 ntBASIC17.89■□□□□ 0.45
VARSP26640 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
VARSP26640 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VARSP26640 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VARSP26640 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.89■□□□□ 0.45
VARSP26640 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.89■□□□□ 0.45
VARSP26640 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VARSP26640 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VARSP26640 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.89■□□□□ 0.45
VARSP26640 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VARSP26640 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VARSP26640 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VARSP26640 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VARSP26640 HMGA1P5-201ENST00000412453 271 ntBASIC17.89■□□□□ 0.45
VARSP26640 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.89■□□□□ 0.45
VARSP26640 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.89■□□□□ 0.45
VARSP26640 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VARSP26640 AC010203.1-204ENST00000548782 407 ntBASIC17.89■□□□□ 0.45
VARSP26640 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VARSP26640 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.89■□□□□ 0.45
VARSP26640 MYC-208ENST00000641036 567 ntBASIC17.89■□□□□ 0.45
VARSP26640 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.89■□□□□ 0.45
VARSP26640 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.89■□□□□ 0.45
VARSP26640 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.89■□□□□ 0.45
VARSP26640 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VARSP26640 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VARSP26640 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.89■□□□□ 0.45
VARSP26640 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.89■□□□□ 0.45
VARSP26640 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.89■□□□□ 0.45
VARSP26640 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
VARSP26640 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms