Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCL1P22362 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL1P22362 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL1P22362 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL1P22362 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.68■□□□□ 0.1
CCL1P22362 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.68■□□□□ 0.1
CCL1P22362 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL1P22362 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL1P22362 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL1P22362 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
CCL1P22362 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL1P22362 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCL1P22362 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL1P22362 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL1P22362 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL1P22362 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCL1P22362 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL1P22362 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.68■□□□□ 0.1
CCL1P22362 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.68■□□□□ 0.1
CCL1P22362 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL1P22362 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCL1P22362 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCL1P22362 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL1P22362 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL1P22362 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL1P22362 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL1P22362 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCL1P22362 AC009947.2-201ENST00000444014 672 ntBASIC15.68■□□□□ 0.1
CCL1P22362 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.68■□□□□ 0.1
CCL1P22362 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
CCL1P22362 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL1P22362 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.68■□□□□ 0.1
CCL1P22362 AC010947.1-201ENST00000623454 693 ntBASIC15.68■□□□□ 0.1
CCL1P22362 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL1P22362 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCL1P22362 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCL1P22362 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCL1P22362 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
CCL1P22362 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL1P22362 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCL1P22362 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCL1P22362 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCL1P22362 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCL1P22362 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL1P22362 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL1P22362 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.67■□□□□ 0.1
CCL1P22362 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCL1P22362 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL1P22362 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCL1P22362 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL1P22362 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.67■□□□□ 0.1
CCL1P22362 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL1P22362 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
CCL1P22362 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.67■□□□□ 0.1
CCL1P22362 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL1P22362 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCL1P22362 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL1P22362 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL1P22362 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL1P22362 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL1P22362 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL1P22362 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CCL1P22362 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CCL1P22362 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL1P22362 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CCL1P22362 MIR3917-201ENST00000580971 93 ntBASIC15.67■□□□□ 0.1
CCL1P22362 MIR4497-201ENST00000583208 89 ntBASIC15.67■□□□□ 0.1
CCL1P22362 FAM87A-204ENST00000613235 858 ntBASIC15.67■□□□□ 0.1
CCL1P22362 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CCL1P22362 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCL1P22362 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCL1P22362 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL1P22362 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
CCL1P22362 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL1P22362 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL1P22362 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL1P22362 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CCL1P22362 KRT8P9-201ENST00000558927 1449 ntBASIC15.67■□□□□ 0.1
CCL1P22362 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CCL1P22362 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
CCL1P22362 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.67■□□□□ 0.1
CCL1P22362 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL1P22362 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL1P22362 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL1P22362 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL1P22362 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL1P22362 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.67■□□□□ 0.1
CCL1P22362 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL1P22362 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL1P22362 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL1P22362 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.66■□□□□ 0.1
CCL1P22362 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.66■□□□□ 0.1
CCL1P22362 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.66■□□□□ 0.1
CCL1P22362 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL1P22362 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL1P22362 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL1P22362 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL1P22362 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL1P22362 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.66■□□□□ 0.1
CCL1P22362 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms