Protein–RNA interactions for Protein: P20339

RAB5A, Ras-related protein Rab-5A, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5AP20339 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB5AP20339 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB5AP20339 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB5AP20339 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB5AP20339 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
RAB5AP20339 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB5AP20339 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RAB5AP20339 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB5AP20339 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB5AP20339 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB5AP20339 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
RAB5AP20339 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB5AP20339 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB5AP20339 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB5AP20339 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB5AP20339 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB5AP20339 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB5AP20339 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB5AP20339 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC14.18□□□□□ -0.14
RAB5AP20339 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB5AP20339 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB5AP20339 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RAB5AP20339 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB5AP20339 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB5AP20339 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB5AP20339 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB5AP20339 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB5AP20339 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.18□□□□□ -0.14
RAB5AP20339 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB5AP20339 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB5AP20339 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB5AP20339 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB5AP20339 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB5AP20339 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB5AP20339 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB5AP20339 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RAB5AP20339 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RAB5AP20339 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
RAB5AP20339 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB5AP20339 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RAB5AP20339 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB5AP20339 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB5AP20339 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB5AP20339 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB5AP20339 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB5AP20339 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
RAB5AP20339 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB5AP20339 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
RAB5AP20339 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC14.17□□□□□ -0.14
RAB5AP20339 AC099063.4-201ENST00000641099 1602 ntBASIC14.17□□□□□ -0.14
RAB5AP20339 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB5AP20339 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC14.17□□□□□ -0.14
RAB5AP20339 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC14.17□□□□□ -0.14
RAB5AP20339 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB5AP20339 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC14.17□□□□□ -0.14
RAB5AP20339 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB5AP20339 AL499627.1-201ENST00000569373 2188 ntBASIC14.17□□□□□ -0.14
RAB5AP20339 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB5AP20339 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB5AP20339 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB5AP20339 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB5AP20339 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB5AP20339 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB5AP20339 LYSMD4-203ENST00000378904 2122 ntBASIC14.17□□□□□ -0.14
RAB5AP20339 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB5AP20339 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC14.16□□□□□ -0.14
RAB5AP20339 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5AP20339 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5AP20339 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
RAB5AP20339 ANKRD18DP-204ENST00000455355 1975 ntBASIC14.16□□□□□ -0.14
RAB5AP20339 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5AP20339 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB5AP20339 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.16□□□□□ -0.14
RAB5AP20339 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5AP20339 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5AP20339 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5AP20339 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
RAB5AP20339 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5AP20339 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5AP20339 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5AP20339 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5AP20339 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC14.16□□□□□ -0.14
RAB5AP20339 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RAB5AP20339 PGM5P4-201ENST00000421970 445 ntBASIC14.16□□□□□ -0.14
RAB5AP20339 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC14.16□□□□□ -0.14
RAB5AP20339 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC14.16□□□□□ -0.14
RAB5AP20339 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5AP20339 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC14.16□□□□□ -0.14
RAB5AP20339 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5AP20339 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5AP20339 AL356652.1-201ENST00000615962 565 ntBASIC14.16□□□□□ -0.14
RAB5AP20339 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB5AP20339 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5AP20339 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
RAB5AP20339 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5AP20339 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5AP20339 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB5AP20339 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB5AP20339 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RAB5AP20339 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms