Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT4P19013 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KRT4P19013 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT4P19013 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT4P19013 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.31■□□□□ 0.52
KRT4P19013 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT4P19013 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT4P19013 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.31■□□□□ 0.52
KRT4P19013 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
KRT4P19013 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT4P19013 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.31■□□□□ 0.52
KRT4P19013 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT4P19013 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
KRT4P19013 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KRT4P19013 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
KRT4P19013 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.31■□□□□ 0.52
KRT4P19013 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
KRT4P19013 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.31■□□□□ 0.52
KRT4P19013 AC110285.5-201ENST00000611501 352 ntBASIC18.31■□□□□ 0.52
KRT4P19013 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.31■□□□□ 0.52
KRT4P19013 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KRT4P19013 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT4P19013 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT4P19013 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.31■□□□□ 0.52
KRT4P19013 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT4P19013 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT4P19013 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT4P19013 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.31■□□□□ 0.52
KRT4P19013 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.31■□□□□ 0.52
KRT4P19013 AC034236.2-201ENST00000606662 1610 ntBASIC18.31■□□□□ 0.52
KRT4P19013 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRT4P19013 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRT4P19013 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.3■□□□□ 0.52
KRT4P19013 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRT4P19013 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.3■□□□□ 0.52
KRT4P19013 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT4P19013 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRT4P19013 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
KRT4P19013 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT4P19013 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.3■□□□□ 0.52
KRT4P19013 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT4P19013 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
KRT4P19013 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT4P19013 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT4P19013 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT4P19013 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
KRT4P19013 FAM207BP-201ENST00000447172 505 ntBASIC18.3■□□□□ 0.52
KRT4P19013 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.3■□□□□ 0.52
KRT4P19013 AC133681.1-201ENST00000465482 601 ntBASIC18.3■□□□□ 0.52
KRT4P19013 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.3■□□□□ 0.52
KRT4P19013 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT4P19013 AC130371.2-201ENST00000619443 611 ntBASIC18.3■□□□□ 0.52
KRT4P19013 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT4P19013 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT4P19013 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT4P19013 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
KRT4P19013 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT4P19013 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT4P19013 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
KRT4P19013 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.3■□□□□ 0.52
KRT4P19013 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT4P19013 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT4P19013 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRT4P19013 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT4P19013 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT4P19013 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.3■□□□□ 0.52
KRT4P19013 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.3■□□□□ 0.52
KRT4P19013 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.3■□□□□ 0.52
KRT4P19013 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KRT4P19013 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT4P19013 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
KRT4P19013 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
KRT4P19013 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KRT4P19013 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT4P19013 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
KRT4P19013 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT4P19013 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KRT4P19013 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KRT4P19013 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT4P19013 SDHAP2-201ENST00000455183 2001 ntBASIC18.29■□□□□ 0.52
KRT4P19013 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT4P19013 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT4P19013 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT4P19013 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT4P19013 RNA5SP413-201ENST00000516373 109 ntBASIC18.29■□□□□ 0.52
KRT4P19013 AC026271.3-201ENST00000571884 352 ntBASIC18.29■□□□□ 0.52
KRT4P19013 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT4P19013 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KRT4P19013 KRT16P1-201ENST00000399124 1418 ntBASIC18.29■□□□□ 0.52
KRT4P19013 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT4P19013 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.29■□□□□ 0.52
KRT4P19013 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT4P19013 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT4P19013 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.29■□□□□ 0.52
KRT4P19013 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT4P19013 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
KRT4P19013 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT4P19013 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.29■□□□□ 0.52
KRT4P19013 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT4P19013 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms