Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NELFEP18615 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NELFEP18615 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
NELFEP18615 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.01■□□□□ 0.47
NELFEP18615 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NELFEP18615 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.01■□□□□ 0.47
NELFEP18615 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NELFEP18615 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NELFEP18615 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NELFEP18615 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.01■□□□□ 0.47
NELFEP18615 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NELFEP18615 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NELFEP18615 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NELFEP18615 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NELFEP18615 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NELFEP18615 AC036111.1-201ENST00000533973 1582 ntBASIC18.01■□□□□ 0.47
NELFEP18615 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
NELFEP18615 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
NELFEP18615 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
NELFEP18615 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.01■□□□□ 0.47
NELFEP18615 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NELFEP18615 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NELFEP18615 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
NELFEP18615 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.01■□□□□ 0.47
NELFEP18615 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.01■□□□□ 0.47
NELFEP18615 MIR3180-5-201ENST00000583743 153 ntBASIC18.01■□□□□ 0.47
NELFEP18615 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
NELFEP18615 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.01■□□□□ 0.47
NELFEP18615 AP000550.4-202ENST00000639755 178 ntBASIC18.01■□□□□ 0.47
NELFEP18615 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
NELFEP18615 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NELFEP18615 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.01■□□□□ 0.47
NELFEP18615 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NELFEP18615 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NELFEP18615 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NELFEP18615 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NELFEP18615 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NELFEP18615 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NELFEP18615 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.01■□□□□ 0.47
NELFEP18615 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.01■□□□□ 0.47
NELFEP18615 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NELFEP18615 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NELFEP18615 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.01■□□□□ 0.47
NELFEP18615 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NELFEP18615 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NELFEP18615 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
NELFEP18615 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
NELFEP18615 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
NELFEP18615 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
NELFEP18615 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
NELFEP18615 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18■□□□□ 0.47
NELFEP18615 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
NELFEP18615 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
NELFEP18615 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NELFEP18615 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18■□□□□ 0.47
NELFEP18615 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18■□□□□ 0.47
NELFEP18615 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
NELFEP18615 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18■□□□□ 0.47
NELFEP18615 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18■□□□□ 0.47
NELFEP18615 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18■□□□□ 0.47
NELFEP18615 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18■□□□□ 0.47
NELFEP18615 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NELFEP18615 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18■□□□□ 0.47
NELFEP18615 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NELFEP18615 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
NELFEP18615 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18■□□□□ 0.47
NELFEP18615 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
NELFEP18615 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
NELFEP18615 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
NELFEP18615 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
NELFEP18615 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NELFEP18615 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
NELFEP18615 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
NELFEP18615 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NELFEP18615 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NELFEP18615 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NELFEP18615 FEM1AP3-201ENST00000403722 1741 ntBASIC17.99■□□□□ 0.47
NELFEP18615 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.99■□□□□ 0.47
NELFEP18615 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
NELFEP18615 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NELFEP18615 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NELFEP18615 PCED1CP-201ENST00000419887 785 ntBASIC17.99■□□□□ 0.47
NELFEP18615 UPK3BP1-201ENST00000428678 509 ntBASIC17.99■□□□□ 0.47
NELFEP18615 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NELFEP18615 AC112907.2-201ENST00000448639 330 ntBASIC17.99■□□□□ 0.47
NELFEP18615 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NELFEP18615 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.99■□□□□ 0.47
NELFEP18615 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.99■□□□□ 0.47
NELFEP18615 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.99■□□□□ 0.47
NELFEP18615 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.99■□□□□ 0.47
NELFEP18615 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NELFEP18615 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NELFEP18615 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
NELFEP18615 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NELFEP18615 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.99■□□□□ 0.47
NELFEP18615 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NELFEP18615 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.99■□□□□ 0.47
NELFEP18615 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NELFEP18615 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.99■□□□□ 0.47
NELFEP18615 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms