Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.3■□□□□ 0.52
THRAP10827 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.3■□□□□ 0.52
THRAP10827 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.3■□□□□ 0.52
THRAP10827 AC126763.1-201ENST00000552015 2118 ntBASIC18.3■□□□□ 0.52
THRAP10827 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.3■□□□□ 0.52
THRAP10827 AC140113.3-201ENST00000605663 199 ntBASIC18.3■□□□□ 0.52
THRAP10827 AC008622.2-201ENST00000617006 1229 ntBASIC18.3■□□□□ 0.52
THRAP10827 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
THRAP10827 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
THRAP10827 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
THRAP10827 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.3■□□□□ 0.52
THRAP10827 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
THRAP10827 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
THRAP10827 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
THRAP10827 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
THRAP10827 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.3■□□□□ 0.52
THRAP10827 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
THRAP10827 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
THRAP10827 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
THRAP10827 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
THRAP10827 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
THRAP10827 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
THRAP10827 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.29■□□□□ 0.52
THRAP10827 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
THRAP10827 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
THRAP10827 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
THRAP10827 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
THRAP10827 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
THRAP10827 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
THRAP10827 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
THRAP10827 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
THRAP10827 AP000523.1-201ENST00000398242 1049 ntBASIC18.29■□□□□ 0.52
THRAP10827 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
THRAP10827 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.29■□□□□ 0.52
THRAP10827 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.29■□□□□ 0.52
THRAP10827 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
THRAP10827 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
THRAP10827 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
THRAP10827 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
THRAP10827 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
THRAP10827 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
THRAP10827 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
THRAP10827 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.29■□□□□ 0.52
THRAP10827 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
THRAP10827 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
THRAP10827 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.28■□□□□ 0.52
THRAP10827 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
THRAP10827 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
THRAP10827 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
THRAP10827 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
THRAP10827 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.28■□□□□ 0.52
THRAP10827 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.28■□□□□ 0.52
THRAP10827 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.28■□□□□ 0.52
THRAP10827 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
THRAP10827 UPK3BP1-201ENST00000428678 509 ntBASIC18.28■□□□□ 0.52
THRAP10827 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.28■□□□□ 0.52
THRAP10827 AL359075.1-203ENST00000462729 1002 ntBASIC18.28■□□□□ 0.52
THRAP10827 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.28■□□□□ 0.52
THRAP10827 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
THRAP10827 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.28■□□□□ 0.52
THRAP10827 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.28■□□□□ 0.52
THRAP10827 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
THRAP10827 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.28■□□□□ 0.52
THRAP10827 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.28■□□□□ 0.52
THRAP10827 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.28■□□□□ 0.52
THRAP10827 AL121956.5-201ENST00000625261 221 ntBASIC18.28■□□□□ 0.52
THRAP10827 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
THRAP10827 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
THRAP10827 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
THRAP10827 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
THRAP10827 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
THRAP10827 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.28■□□□□ 0.52
THRAP10827 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
THRAP10827 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
THRAP10827 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
THRAP10827 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
THRAP10827 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
THRAP10827 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.28■□□□□ 0.52
THRAP10827 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.28■□□□□ 0.52
THRAP10827 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
THRAP10827 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
THRAP10827 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
THRAP10827 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.27■□□□□ 0.52
THRAP10827 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
THRAP10827 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
THRAP10827 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
THRAP10827 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.27■□□□□ 0.52
THRAP10827 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
THRAP10827 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
THRAP10827 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
THRAP10827 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.27■□□□□ 0.52
THRAP10827 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.27■□□□□ 0.52
THRAP10827 OR6D1P-202ENST00000641007 5290 ntBASIC18.27■□□□□ 0.52
THRAP10827 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
THRAP10827 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
THRAP10827 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
THRAP10827 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.27■□□□□ 0.52
THRAP10827 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
THRAP10827 TSPY23P-201ENST00000440136 739 ntBASIC18.27■□□□□ 0.52
THRAP10827 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms