Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SMIM17P0DL12 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
SMIM17P0DL12 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC13.6□□□□□ -0.23
SMIM17P0DL12 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC13.6□□□□□ -0.23
SMIM17P0DL12 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC13.6□□□□□ -0.23
SMIM17P0DL12 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC13.6□□□□□ -0.23
SMIM17P0DL12 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
SMIM17P0DL12 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM17P0DL12 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
SMIM17P0DL12 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM17P0DL12 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.6□□□□□ -0.23
SMIM17P0DL12 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM17P0DL12 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SMIM17P0DL12 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM17P0DL12 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM17P0DL12 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM17P0DL12 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM17P0DL12 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SMIM17P0DL12 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM17P0DL12 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM17P0DL12 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM17P0DL12 HEIH-201ENST00000623091 1652 ntBASIC13.59□□□□□ -0.23
SMIM17P0DL12 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM17P0DL12 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
SMIM17P0DL12 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM17P0DL12 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC13.59□□□□□ -0.23
SMIM17P0DL12 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
SMIM17P0DL12 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM17P0DL12 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC13.59□□□□□ -0.23
SMIM17P0DL12 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC13.59□□□□□ -0.23
SMIM17P0DL12 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM17P0DL12 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM17P0DL12 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC13.59□□□□□ -0.23
SMIM17P0DL12 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM17P0DL12 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM17P0DL12 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM17P0DL12 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.59□□□□□ -0.23
SMIM17P0DL12 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM17P0DL12 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM17P0DL12 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM17P0DL12 METTL15-202ENST00000403099 795 ntTSL 5 BASIC13.59□□□□□ -0.23
SMIM17P0DL12 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC13.59□□□□□ -0.23
SMIM17P0DL12 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC13.59□□□□□ -0.23
SMIM17P0DL12 RHEB-204ENST00000472642 900 ntTSL 3 BASIC13.59□□□□□ -0.23
SMIM17P0DL12 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC13.59□□□□□ -0.23
SMIM17P0DL12 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM17P0DL12 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC13.59□□□□□ -0.23
SMIM17P0DL12 AL050303.2-201ENST00000619798 666 ntBASIC13.59□□□□□ -0.23
SMIM17P0DL12 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM17P0DL12 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM17P0DL12 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC13.59□□□□□ -0.23
SMIM17P0DL12 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM17P0DL12 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM17P0DL12 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM17P0DL12 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC13.59□□□□□ -0.23
SMIM17P0DL12 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC13.59□□□□□ -0.23
SMIM17P0DL12 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM17P0DL12 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SMIM17P0DL12 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
SMIM17P0DL12 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM17P0DL12 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM17P0DL12 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM17P0DL12 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM17P0DL12 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC13.59□□□□□ -0.23
SMIM17P0DL12 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM17P0DL12 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM17P0DL12 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM17P0DL12 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
SMIM17P0DL12 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SMIM17P0DL12 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
SMIM17P0DL12 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
SMIM17P0DL12 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM17P0DL12 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM17P0DL12 SNAI3-AS1-205ENST00000568633 2096 ntBASIC13.59□□□□□ -0.23
SMIM17P0DL12 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM17P0DL12 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC13.59□□□□□ -0.23
SMIM17P0DL12 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
SMIM17P0DL12 TPR-209ENST00000613151 2478 ntTSL 5 BASIC13.58□□□□□ -0.23
SMIM17P0DL12 LINC00896-202ENST00000609602 2128 ntBASIC13.58□□□□□ -0.23
SMIM17P0DL12 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.58□□□□□ -0.23
SMIM17P0DL12 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SMIM17P0DL12 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM17P0DL12 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM17P0DL12 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM17P0DL12 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM17P0DL12 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM17P0DL12 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM17P0DL12 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM17P0DL12 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM17P0DL12 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
SMIM17P0DL12 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM17P0DL12 TSPY23P-201ENST00000440136 739 ntBASIC13.58□□□□□ -0.24
SMIM17P0DL12 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM17P0DL12 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC13.58□□□□□ -0.24
SMIM17P0DL12 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC13.58□□□□□ -0.24
SMIM17P0DL12 AC083906.2-201ENST00000511578 360 ntBASIC13.58□□□□□ -0.24
SMIM17P0DL12 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM17P0DL12 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
SMIM17P0DL12 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC13.58□□□□□ -0.24
SMIM17P0DL12 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms