Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
SP9P0CG40 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SP9P0CG40 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SP9P0CG40 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.86■□□□□ 0.45
SP9P0CG40 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.86■□□□□ 0.45
SP9P0CG40 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.86■□□□□ 0.45
SP9P0CG40 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.86■□□□□ 0.45
SP9P0CG40 AC007967.3-201ENST00000434308 558 ntBASIC17.86■□□□□ 0.45
SP9P0CG40 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.86■□□□□ 0.45
SP9P0CG40 AC108073.2-201ENST00000464002 357 ntBASIC17.86■□□□□ 0.45
SP9P0CG40 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.86■□□□□ 0.45
SP9P0CG40 AP000344.2-201ENST00000512987 629 ntBASIC17.86■□□□□ 0.45
SP9P0CG40 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.86■□□□□ 0.45
SP9P0CG40 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.86■□□□□ 0.45
SP9P0CG40 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.86■□□□□ 0.45
SP9P0CG40 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.86■□□□□ 0.45
SP9P0CG40 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.86■□□□□ 0.45
SP9P0CG40 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SP9P0CG40 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SP9P0CG40 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SP9P0CG40 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SP9P0CG40 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SP9P0CG40 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SP9P0CG40 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SP9P0CG40 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SP9P0CG40 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SP9P0CG40 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.86■□□□□ 0.45
SP9P0CG40 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SP9P0CG40 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SP9P0CG40 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SP9P0CG40 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SP9P0CG40 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SP9P0CG40 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.85■□□□□ 0.45
SP9P0CG40 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.85■□□□□ 0.45
SP9P0CG40 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SP9P0CG40 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SP9P0CG40 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.85■□□□□ 0.45
SP9P0CG40 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
SP9P0CG40 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SP9P0CG40 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SP9P0CG40 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.85■□□□□ 0.45
SP9P0CG40 AL589182.2-201ENST00000619332 1049 ntBASIC17.85■□□□□ 0.45
SP9P0CG40 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.85■□□□□ 0.45
SP9P0CG40 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SP9P0CG40 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SP9P0CG40 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.84■□□□□ 0.45
SP9P0CG40 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SP9P0CG40 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SP9P0CG40 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.84■□□□□ 0.45
SP9P0CG40 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.84■□□□□ 0.45
SP9P0CG40 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SP9P0CG40 SIGLEC16-201ENST00000599858 1437 ntBASIC17.84■□□□□ 0.45
SP9P0CG40 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SP9P0CG40 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SP9P0CG40 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SP9P0CG40 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SP9P0CG40 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
SP9P0CG40 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.84■□□□□ 0.45
SP9P0CG40 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.84■□□□□ 0.45
SP9P0CG40 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.84■□□□□ 0.45
SP9P0CG40 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SP9P0CG40 AC190387.1-201ENST00000551683 408 ntBASIC17.84■□□□□ 0.45
SP9P0CG40 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.84■□□□□ 0.45
SP9P0CG40 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.84■□□□□ 0.45
SP9P0CG40 MIR4745-201ENST00000577608 62 ntBASIC17.84■□□□□ 0.45
SP9P0CG40 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.84■□□□□ 0.45
SP9P0CG40 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.84■□□□□ 0.45
SP9P0CG40 AC004706.3-202ENST00000621574 984 ntBASIC17.84■□□□□ 0.45
SP9P0CG40 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SP9P0CG40 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SP9P0CG40 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SP9P0CG40 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.84■□□□□ 0.45
SP9P0CG40 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SP9P0CG40 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SP9P0CG40 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SP9P0CG40 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SP9P0CG40 CLDN5-201ENST00000403084 2357 ntBASIC17.83■□□□□ 0.45
SP9P0CG40 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SP9P0CG40 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.83■□□□□ 0.45
SP9P0CG40 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
SP9P0CG40 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SP9P0CG40 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SP9P0CG40 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.83■□□□□ 0.44
SP9P0CG40 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.83■□□□□ 0.44
SP9P0CG40 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SP9P0CG40 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SP9P0CG40 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SP9P0CG40 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.83■□□□□ 0.44
SP9P0CG40 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.83■□□□□ 0.44
SP9P0CG40 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SP9P0CG40 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SP9P0CG40 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SP9P0CG40 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.83■□□□□ 0.44
SP9P0CG40 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
SP9P0CG40 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SP9P0CG40 AC006504.4-201ENST00000592118 1568 ntBASIC17.83■□□□□ 0.44
SP9P0CG40 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SP9P0CG40 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SP9P0CG40 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SP9P0CG40 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms