Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.84■■□□□ 1.09
APPP05067 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
APPP05067 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
APPP05067 LINC01126-201ENST00000623515 1646 ntBASIC21.84■■□□□ 1.09
APPP05067 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
APPP05067 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.83■■□□□ 1.09
APPP05067 AL024508.2-201ENST00000607749 1894 ntBASIC21.83■■□□□ 1.09
APPP05067 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
APPP05067 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.83■■□□□ 1.09
APPP05067 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
APPP05067 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
APPP05067 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
APPP05067 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
APPP05067 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
APPP05067 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
APPP05067 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.83■■□□□ 1.09
APPP05067 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.83■■□□□ 1.09
APPP05067 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
APPP05067 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC21.83■■□□□ 1.09
APPP05067 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
APPP05067 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
APPP05067 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.83■■□□□ 1.09
APPP05067 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
APPP05067 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
APPP05067 UPK3BP1-201ENST00000428678 509 ntBASIC21.83■■□□□ 1.09
APPP05067 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.83■■□□□ 1.09
APPP05067 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.83■■□□□ 1.09
APPP05067 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.09
APPP05067 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.83■■□□□ 1.09
APPP05067 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC21.83■■□□□ 1.09
APPP05067 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.83■■□□□ 1.09
APPP05067 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
APPP05067 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
APPP05067 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.83■■□□□ 1.08
APPP05067 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
APPP05067 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.83■■□□□ 1.08
APPP05067 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
APPP05067 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.83■■□□□ 1.08
APPP05067 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
APPP05067 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
APPP05067 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.82■■□□□ 1.08
APPP05067 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
APPP05067 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.82■■□□□ 1.08
APPP05067 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
APPP05067 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
APPP05067 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
APPP05067 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.82■■□□□ 1.08
APPP05067 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
APPP05067 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21.82■■□□□ 1.08
APPP05067 AC005332.3-201ENST00000589904 676 ntBASIC21.82■■□□□ 1.08
APPP05067 TK1-205ENST00000590862 642 ntTSL 3 BASIC21.82■■□□□ 1.08
APPP05067 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.82■■□□□ 1.08
APPP05067 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
APPP05067 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
APPP05067 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
APPP05067 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.82■■□□□ 1.08
APPP05067 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.82■■□□□ 1.08
APPP05067 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
APPP05067 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
APPP05067 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
APPP05067 ESPNP-201ENST00000270691 2015 ntBASIC21.82■■□□□ 1.08
APPP05067 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
APPP05067 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
APPP05067 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
APPP05067 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
APPP05067 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.81■■□□□ 1.08
APPP05067 Z83836.1-201ENST00000624605 1642 ntBASIC21.81■■□□□ 1.08
APPP05067 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC21.81■■□□□ 1.08
APPP05067 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
APPP05067 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
APPP05067 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
APPP05067 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
APPP05067 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
APPP05067 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.81■■□□□ 1.08
APPP05067 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
APPP05067 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
APPP05067 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC21.81■■□□□ 1.08
APPP05067 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC21.81■■□□□ 1.08
APPP05067 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.81■■□□□ 1.08
APPP05067 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.81■■□□□ 1.08
APPP05067 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.81■■□□□ 1.08
APPP05067 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.81■■□□□ 1.08
APPP05067 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
APPP05067 AC093458.2-201ENST00000623150 629 ntBASIC21.81■■□□□ 1.08
APPP05067 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.81■■□□□ 1.08
APPP05067 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC21.81■■□□□ 1.08
APPP05067 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
APPP05067 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
APPP05067 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
APPP05067 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
APPP05067 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
APPP05067 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.81■■□□□ 1.08
APPP05067 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
APPP05067 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
APPP05067 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
APPP05067 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
APPP05067 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
APPP05067 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
APPP05067 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.8■■□□□ 1.08
APPP05067 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms