Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV3P03979 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TRGV3P03979 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV3P03979 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV3P03979 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV3P03979 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
TRGV3P03979 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14.36□□□□□ -0.11
TRGV3P03979 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
TRGV3P03979 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV3P03979 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV3P03979 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV3P03979 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV3P03979 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV3P03979 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV3P03979 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV3P03979 RASA4DP-201ENST00000460726 1199 ntBASIC14.36□□□□□ -0.11
TRGV3P03979 AL359075.1-203ENST00000462729 1002 ntBASIC14.36□□□□□ -0.11
TRGV3P03979 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC14.36□□□□□ -0.11
TRGV3P03979 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.36□□□□□ -0.11
TRGV3P03979 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.36□□□□□ -0.11
TRGV3P03979 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV3P03979 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
TRGV3P03979 AL157888.1-201ENST00000631930 593 ntBASIC14.36□□□□□ -0.11
TRGV3P03979 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV3P03979 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV3P03979 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV3P03979 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV3P03979 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.36□□□□□ -0.11
TRGV3P03979 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV3P03979 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV3P03979 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRGV3P03979 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV3P03979 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC14.36□□□□□ -0.11
TRGV3P03979 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV3P03979 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV3P03979 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV3P03979 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
TRGV3P03979 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV3P03979 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV3P03979 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV3P03979 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV3P03979 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV3P03979 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV3P03979 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV3P03979 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRGV3P03979 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC14.35□□□□□ -0.11
TRGV3P03979 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.35□□□□□ -0.11
TRGV3P03979 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV3P03979 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
TRGV3P03979 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV3P03979 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV3P03979 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRGV3P03979 AC090164.3-201ENST00000610780 2143 ntBASIC14.35□□□□□ -0.11
TRGV3P03979 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
TRGV3P03979 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV3P03979 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TRGV3P03979 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV3P03979 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.35□□□□□ -0.11
TRGV3P03979 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRGV3P03979 STARP1-201ENST00000397973 869 ntBASIC14.35□□□□□ -0.11
TRGV3P03979 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV3P03979 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.35□□□□□ -0.11
TRGV3P03979 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV3P03979 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC14.35□□□□□ -0.11
TRGV3P03979 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV3P03979 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV3P03979 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC14.35□□□□□ -0.11
TRGV3P03979 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC14.35□□□□□ -0.11
TRGV3P03979 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV3P03979 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV3P03979 ADK-206ENST00000541550 2222 ntTSL 2 BASIC14.35□□□□□ -0.11
TRGV3P03979 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV3P03979 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.35□□□□□ -0.11
TRGV3P03979 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV3P03979 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV3P03979 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.34□□□□□ -0.11
TRGV3P03979 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV3P03979 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.34□□□□□ -0.11
TRGV3P03979 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV3P03979 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV3P03979 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV3P03979 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV3P03979 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV3P03979 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV3P03979 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.34□□□□□ -0.11
TRGV3P03979 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV3P03979 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV3P03979 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV3P03979 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV3P03979 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC14.34□□□□□ -0.11
TRGV3P03979 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
TRGV3P03979 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.34□□□□□ -0.11
TRGV3P03979 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC14.34□□□□□ -0.11
TRGV3P03979 AC022616.7-201ENST00000525383 220 ntBASIC14.34□□□□□ -0.11
TRGV3P03979 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.34□□□□□ -0.11
TRGV3P03979 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.34□□□□□ -0.11
TRGV3P03979 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV3P03979 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.34□□□□□ -0.11
TRGV3P03979 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV3P03979 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms