Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
MT-ND1P03886 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
MT-ND1P03886 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MT-ND1P03886 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MT-ND1P03886 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MT-ND1P03886 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
MT-ND1P03886 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MT-ND1P03886 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MT-ND1P03886 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MT-ND1P03886 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MT-ND1P03886 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.21■□□□□ 0.35
MT-ND1P03886 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.21■□□□□ 0.35
MT-ND1P03886 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.21■□□□□ 0.35
MT-ND1P03886 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MT-ND1P03886 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MT-ND1P03886 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.21■□□□□ 0.35
MT-ND1P03886 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MT-ND1P03886 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.21■□□□□ 0.35
MT-ND1P03886 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
MT-ND1P03886 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
MT-ND1P03886 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
MT-ND1P03886 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
MT-ND1P03886 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.21■□□□□ 0.35
MT-ND1P03886 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
MT-ND1P03886 HTR7P1-201ENST00000538670 1336 ntBASIC17.21■□□□□ 0.34
MT-ND1P03886 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
MT-ND1P03886 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND1P03886 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND1P03886 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND1P03886 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND1P03886 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND1P03886 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.2■□□□□ 0.34
MT-ND1P03886 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND1P03886 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
MT-ND1P03886 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND1P03886 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND1P03886 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
MT-ND1P03886 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
MT-ND1P03886 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND1P03886 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND1P03886 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND1P03886 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND1P03886 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.2■□□□□ 0.34
MT-ND1P03886 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.2■□□□□ 0.34
MT-ND1P03886 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND1P03886 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND1P03886 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND1P03886 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.2■□□□□ 0.34
MT-ND1P03886 AC006058.3-201ENST00000606217 1069 ntBASIC17.2■□□□□ 0.34
MT-ND1P03886 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND1P03886 AC073648.6-201ENST00000641589 218 ntBASIC17.2■□□□□ 0.34
MT-ND1P03886 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND1P03886 AD000864.1-201ENST00000624076 2295 ntBASIC17.2■□□□□ 0.34
MT-ND1P03886 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND1P03886 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND1P03886 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND1P03886 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND1P03886 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
MT-ND1P03886 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND1P03886 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.2■□□□□ 0.34
MT-ND1P03886 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.2■□□□□ 0.34
MT-ND1P03886 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
MT-ND1P03886 PHGDH-209ENST00000641074 1780 ntBASIC17.2■□□□□ 0.34
MT-ND1P03886 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
MT-ND1P03886 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.2■□□□□ 0.34
MT-ND1P03886 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND1P03886 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND1P03886 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.2■□□□□ 0.34
MT-ND1P03886 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
MT-ND1P03886 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MT-ND1P03886 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MT-ND1P03886 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
MT-ND1P03886 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
MT-ND1P03886 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.19■□□□□ 0.34
MT-ND1P03886 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MT-ND1P03886 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MT-ND1P03886 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
MT-ND1P03886 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MT-ND1P03886 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MT-ND1P03886 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.19■□□□□ 0.34
MT-ND1P03886 NIFKP9-201ENST00000419265 221 ntBASIC17.19■□□□□ 0.34
MT-ND1P03886 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
MT-ND1P03886 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
MT-ND1P03886 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.19■□□□□ 0.34
MT-ND1P03886 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.19■□□□□ 0.34
MT-ND1P03886 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
MT-ND1P03886 AC131212.4-201ENST00000623606 975 ntBASIC17.19■□□□□ 0.34
MT-ND1P03886 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MT-ND1P03886 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MT-ND1P03886 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
MT-ND1P03886 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
MT-ND1P03886 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MT-ND1P03886 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MT-ND1P03886 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MT-ND1P03886 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
MT-ND1P03886 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MT-ND1P03886 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MT-ND1P03886 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
MT-ND1P03886 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.19■□□□□ 0.34
MT-ND1P03886 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms