Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KRT6AP02538 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
KRT6AP02538 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.68■□□□□ 0.42
KRT6AP02538 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT6AP02538 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.68■□□□□ 0.42
KRT6AP02538 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.68■□□□□ 0.42
KRT6AP02538 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT6AP02538 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.68■□□□□ 0.42
KRT6AP02538 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.68■□□□□ 0.42
KRT6AP02538 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT6AP02538 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KRT6AP02538 MIR3180-4-201ENST00000582223 153 ntBASIC17.68■□□□□ 0.42
KRT6AP02538 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
KRT6AP02538 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
KRT6AP02538 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT6AP02538 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.68■□□□□ 0.42
KRT6AP02538 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KRT6AP02538 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.68■□□□□ 0.42
KRT6AP02538 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
KRT6AP02538 AC112497.1-201ENST00000624824 639 ntBASIC17.68■□□□□ 0.42
KRT6AP02538 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.68■□□□□ 0.42
KRT6AP02538 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT6AP02538 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
KRT6AP02538 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KRT6AP02538 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.68■□□□□ 0.42
KRT6AP02538 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.68■□□□□ 0.42
KRT6AP02538 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT6AP02538 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT6AP02538 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT6AP02538 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.68■□□□□ 0.42
KRT6AP02538 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT6AP02538 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.67■□□□□ 0.42
KRT6AP02538 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.67■□□□□ 0.42
KRT6AP02538 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT6AP02538 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
KRT6AP02538 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
KRT6AP02538 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.67■□□□□ 0.42
KRT6AP02538 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KRT6AP02538 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT6AP02538 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT6AP02538 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.67■□□□□ 0.42
KRT6AP02538 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT6AP02538 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT6AP02538 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
KRT6AP02538 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.67■□□□□ 0.42
KRT6AP02538 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
KRT6AP02538 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.67■□□□□ 0.42
KRT6AP02538 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT6AP02538 TSPY14P-201ENST00000303979 915 ntBASIC17.67■□□□□ 0.42
KRT6AP02538 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.67■□□□□ 0.42
KRT6AP02538 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.67■□□□□ 0.42
KRT6AP02538 AL355075.4-201ENST00000554988 638 ntBASIC17.67■□□□□ 0.42
KRT6AP02538 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
KRT6AP02538 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT6AP02538 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KRT6AP02538 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KRT6AP02538 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.67■□□□□ 0.42
KRT6AP02538 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT6AP02538 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KRT6AP02538 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT6AP02538 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT6AP02538 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT6AP02538 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.66■□□□□ 0.42
KRT6AP02538 AC099343.3-201ENST00000605834 2503 ntBASIC17.66■□□□□ 0.42
KRT6AP02538 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT6AP02538 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KRT6AP02538 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KRT6AP02538 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.66■□□□□ 0.42
KRT6AP02538 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KRT6AP02538 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KRT6AP02538 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
KRT6AP02538 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT6AP02538 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT6AP02538 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KRT6AP02538 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT6AP02538 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT6AP02538 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT6AP02538 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT6AP02538 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KRT6AP02538 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
KRT6AP02538 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT6AP02538 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.66■□□□□ 0.42
KRT6AP02538 AC128688.1-201ENST00000487626 519 ntBASIC17.66■□□□□ 0.42
KRT6AP02538 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.66■□□□□ 0.42
KRT6AP02538 EGLN1P1-201ENST00000531623 762 ntBASIC17.66■□□□□ 0.42
KRT6AP02538 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.66■□□□□ 0.42
KRT6AP02538 AC104390.1-201ENST00000555663 520 ntBASIC17.66■□□□□ 0.42
KRT6AP02538 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KRT6AP02538 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KRT6AP02538 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT6AP02538 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT6AP02538 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.66■□□□□ 0.42
KRT6AP02538 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.66■□□□□ 0.42
KRT6AP02538 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KRT6AP02538 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT6AP02538 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
KRT6AP02538 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KRT6AP02538 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT6AP02538 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
KRT6AP02538 PCDHB18P-201ENST00000524813 2368 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms