Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.19■□□□□ 0.5
CBX6O95503 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.19■□□□□ 0.5
CBX6O95503 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.19■□□□□ 0.5
CBX6O95503 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.19■□□□□ 0.5
CBX6O95503 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.19■□□□□ 0.5
CBX6O95503 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CBX6O95503 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CBX6O95503 AL121829.2-201ENST00000620908 328 ntBASIC18.19■□□□□ 0.5
CBX6O95503 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CBX6O95503 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CBX6O95503 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.19■□□□□ 0.5
CBX6O95503 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CBX6O95503 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CBX6O95503 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CBX6O95503 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
CBX6O95503 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.19■□□□□ 0.5
CBX6O95503 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CBX6O95503 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CBX6O95503 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CBX6O95503 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CBX6O95503 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CBX6O95503 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CBX6O95503 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CBX6O95503 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CBX6O95503 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CBX6O95503 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CBX6O95503 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CBX6O95503 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CBX6O95503 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CBX6O95503 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CBX6O95503 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CBX6O95503 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CBX6O95503 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CBX6O95503 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CBX6O95503 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CBX6O95503 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.18■□□□□ 0.5
CBX6O95503 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.18■□□□□ 0.5
CBX6O95503 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CBX6O95503 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CBX6O95503 MIR6786-201ENST00000616843 113 ntBASIC18.18■□□□□ 0.5
CBX6O95503 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CBX6O95503 AC005363.2-201ENST00000618631 242 ntBASIC18.18■□□□□ 0.5
CBX6O95503 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.18■□□□□ 0.5
CBX6O95503 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.18■□□□□ 0.5
CBX6O95503 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.18■□□□□ 0.5
CBX6O95503 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CBX6O95503 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CBX6O95503 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.18■□□□□ 0.5
CBX6O95503 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.18■□□□□ 0.5
CBX6O95503 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.18■□□□□ 0.5
CBX6O95503 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
CBX6O95503 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CBX6O95503 BCL2-203ENST00000589955 5011 ntBASIC18.18■□□□□ 0.5
CBX6O95503 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.18■□□□□ 0.5
CBX6O95503 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CBX6O95503 MTMR9LP-203ENST00000426597 1545 ntBASIC18.18■□□□□ 0.5
CBX6O95503 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CBX6O95503 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.18■□□□□ 0.5
CBX6O95503 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.18■□□□□ 0.5
CBX6O95503 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CBX6O95503 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CBX6O95503 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CBX6O95503 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CBX6O95503 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CBX6O95503 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CBX6O95503 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CBX6O95503 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CBX6O95503 FAM197Y1-201ENST00000421178 764 ntBASIC18.17■□□□□ 0.5
CBX6O95503 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.17■□□□□ 0.5
CBX6O95503 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.17■□□□□ 0.5
CBX6O95503 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CBX6O95503 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.17■□□□□ 0.5
CBX6O95503 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.17■□□□□ 0.5
CBX6O95503 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CBX6O95503 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CBX6O95503 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CBX6O95503 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CBX6O95503 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CBX6O95503 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CBX6O95503 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CBX6O95503 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CBX6O95503 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CBX6O95503 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CBX6O95503 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.17■□□□□ 0.5
CBX6O95503 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CBX6O95503 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CBX6O95503 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CBX6O95503 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CBX6O95503 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CBX6O95503 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CBX6O95503 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.16■□□□□ 0.5
CBX6O95503 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
CBX6O95503 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CBX6O95503 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CBX6O95503 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CBX6O95503 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CBX6O95503 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CBX6O95503 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.16■□□□□ 0.5
CBX6O95503 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.16■□□□□ 0.5
CBX6O95503 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms