Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
SIX6O95475 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX6O95475 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SIX6O95475 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.28■□□□□ 0.04
SIX6O95475 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX6O95475 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SIX6O95475 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX6O95475 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SIX6O95475 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX6O95475 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX6O95475 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX6O95475 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SIX6O95475 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SIX6O95475 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SIX6O95475 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.28■□□□□ 0.04
SIX6O95475 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.28■□□□□ 0.04
SIX6O95475 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX6O95475 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX6O95475 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX6O95475 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX6O95475 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.27■□□□□ 0.04
SIX6O95475 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
SIX6O95475 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SIX6O95475 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SIX6O95475 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.27■□□□□ 0.04
SIX6O95475 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SIX6O95475 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SIX6O95475 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SIX6O95475 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SIX6O95475 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SIX6O95475 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SIX6O95475 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SIX6O95475 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SIX6O95475 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SIX6O95475 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
SIX6O95475 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SIX6O95475 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SIX6O95475 AL390719.1-204ENST00000412397 1219 ntBASIC15.27■□□□□ 0.04
SIX6O95475 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC15.27■□□□□ 0.04
SIX6O95475 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SIX6O95475 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SIX6O95475 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.27■□□□□ 0.03
SIX6O95475 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.27■□□□□ 0.03
SIX6O95475 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.27■□□□□ 0.03
SIX6O95475 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SIX6O95475 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.27■□□□□ 0.03
SIX6O95475 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
SIX6O95475 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SIX6O95475 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC15.27■□□□□ 0.03
SIX6O95475 AC106886.4-201ENST00000623557 2502 ntBASIC15.26■□□□□ 0.03
SIX6O95475 DOC2GP-204ENST00000639052 2548 ntBASIC15.26■□□□□ 0.03
SIX6O95475 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIX6O95475 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.26■□□□□ 0.03
SIX6O95475 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC15.26■□□□□ 0.03
SIX6O95475 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIX6O95475 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIX6O95475 FLJ38576-201ENST00000623820 2459 ntBASIC15.26■□□□□ 0.03
SIX6O95475 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIX6O95475 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIX6O95475 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIX6O95475 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SIX6O95475 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.26■□□□□ 0.03
SIX6O95475 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.26■□□□□ 0.03
SIX6O95475 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SIX6O95475 AC103702.1-201ENST00000548801 2630 ntBASIC15.26■□□□□ 0.03
SIX6O95475 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SIX6O95475 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SIX6O95475 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.26■□□□□ 0.03
SIX6O95475 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SIX6O95475 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIX6O95475 AK1-201ENST00000223836 736 ntTSL 3 BASIC15.26■□□□□ 0.03
SIX6O95475 HYI-206ENST00000372434 1025 ntTSL 5 BASIC15.26■□□□□ 0.03
SIX6O95475 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIX6O95475 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SIX6O95475 KRT18P16-201ENST00000510337 1294 ntBASIC15.26■□□□□ 0.03
SIX6O95475 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
SIX6O95475 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC15.26■□□□□ 0.03
SIX6O95475 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SIX6O95475 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC15.26■□□□□ 0.03
SIX6O95475 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIX6O95475 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.26■□□□□ 0.03
SIX6O95475 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SIX6O95475 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIX6O95475 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIX6O95475 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SIX6O95475 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIX6O95475 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.26■□□□□ 0.03
SIX6O95475 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SIX6O95475 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIX6O95475 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SIX6O95475 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIX6O95475 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SIX6O95475 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SIX6O95475 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIX6O95475 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIX6O95475 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.26■□□□□ 0.03
SIX6O95475 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIX6O95475 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SIX6O95475 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIX6O95475 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms