Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 PRSS44-201ENST00000515154 1146 ntBASIC16.04■□□□□ 0.16
KDM4BO94953 CD99P1-205ENST00000527459 561 ntBASIC16.04■□□□□ 0.16
KDM4BO94953 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.04■□□□□ 0.16
KDM4BO94953 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.04■□□□□ 0.16
KDM4BO94953 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KDM4BO94953 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KDM4BO94953 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KDM4BO94953 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
KDM4BO94953 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KDM4BO94953 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KDM4BO94953 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KDM4BO94953 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
KDM4BO94953 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
KDM4BO94953 GNAS-203ENST00000306120 1878 ntBASIC16.03■□□□□ 0.16
KDM4BO94953 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KDM4BO94953 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KDM4BO94953 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.03■□□□□ 0.16
KDM4BO94953 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
KDM4BO94953 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.03■□□□□ 0.16
KDM4BO94953 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
KDM4BO94953 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KDM4BO94953 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
KDM4BO94953 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KDM4BO94953 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KDM4BO94953 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
KDM4BO94953 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KDM4BO94953 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KDM4BO94953 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KDM4BO94953 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.03■□□□□ 0.16
KDM4BO94953 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KDM4BO94953 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KDM4BO94953 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.03■□□□□ 0.16
KDM4BO94953 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.03■□□□□ 0.16
KDM4BO94953 C1QBPP2-201ENST00000528754 825 ntBASIC16.03■□□□□ 0.16
KDM4BO94953 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
KDM4BO94953 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KDM4BO94953 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KDM4BO94953 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KDM4BO94953 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.03■□□□□ 0.16
KDM4BO94953 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KDM4BO94953 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KDM4BO94953 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KDM4BO94953 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
KDM4BO94953 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KDM4BO94953 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KDM4BO94953 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KDM4BO94953 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KDM4BO94953 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KDM4BO94953 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.02■□□□□ 0.16
KDM4BO94953 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.02■□□□□ 0.16
KDM4BO94953 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
KDM4BO94953 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
KDM4BO94953 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
KDM4BO94953 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
KDM4BO94953 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.02■□□□□ 0.16
KDM4BO94953 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.02■□□□□ 0.16
KDM4BO94953 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.02■□□□□ 0.16
KDM4BO94953 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
KDM4BO94953 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.02■□□□□ 0.16
KDM4BO94953 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
KDM4BO94953 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.02■□□□□ 0.16
KDM4BO94953 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
KDM4BO94953 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.02■□□□□ 0.16
KDM4BO94953 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
KDM4BO94953 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
KDM4BO94953 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
KDM4BO94953 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.02■□□□□ 0.16
KDM4BO94953 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
KDM4BO94953 RPS2P4-201ENST00000476944 856 ntBASIC16.02■□□□□ 0.16
KDM4BO94953 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.02■□□□□ 0.16
KDM4BO94953 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.02■□□□□ 0.16
KDM4BO94953 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
KDM4BO94953 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
KDM4BO94953 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
KDM4BO94953 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.02■□□□□ 0.15
KDM4BO94953 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
KDM4BO94953 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
KDM4BO94953 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
KDM4BO94953 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.02■□□□□ 0.15
KDM4BO94953 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
KDM4BO94953 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.02■□□□□ 0.15
KDM4BO94953 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
KDM4BO94953 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.02■□□□□ 0.15
KDM4BO94953 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
KDM4BO94953 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
KDM4BO94953 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
KDM4BO94953 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
KDM4BO94953 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
KDM4BO94953 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
KDM4BO94953 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
KDM4BO94953 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
KDM4BO94953 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
KDM4BO94953 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
KDM4BO94953 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
KDM4BO94953 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
KDM4BO94953 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KDM4BO94953 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
KDM4BO94953 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
KDM4BO94953 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KDM4BO94953 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms