Protein–RNA interactions for Protein: O76009

KRT33A, Keratin, type I cuticular Ha3-I, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT33AO76009 MIR3180-5-201ENST00000583743 153 ntBASIC16.56■□□□□ 0.24
KRT33AO76009 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
KRT33AO76009 FAM87A-204ENST00000613235 858 ntBASIC16.56■□□□□ 0.24
KRT33AO76009 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KRT33AO76009 AC097493.4-201ENST00000641197 219 ntBASIC16.56■□□□□ 0.24
KRT33AO76009 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KRT33AO76009 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KRT33AO76009 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KRT33AO76009 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
KRT33AO76009 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
KRT33AO76009 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT33AO76009 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT33AO76009 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT33AO76009 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT33AO76009 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.55■□□□□ 0.24
KRT33AO76009 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT33AO76009 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KRT33AO76009 AC008556.1-201ENST00000610908 2040 ntBASIC16.55■□□□□ 0.24
KRT33AO76009 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.55■□□□□ 0.24
KRT33AO76009 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
KRT33AO76009 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT33AO76009 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.55■□□□□ 0.24
KRT33AO76009 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.55■□□□□ 0.24
KRT33AO76009 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KRT33AO76009 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.55■□□□□ 0.24
KRT33AO76009 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT33AO76009 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
KRT33AO76009 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT33AO76009 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.55■□□□□ 0.24
KRT33AO76009 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT33AO76009 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.55■□□□□ 0.24
KRT33AO76009 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.55■□□□□ 0.24
KRT33AO76009 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.55■□□□□ 0.24
KRT33AO76009 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT33AO76009 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.55■□□□□ 0.24
KRT33AO76009 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KRT33AO76009 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KRT33AO76009 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
KRT33AO76009 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT33AO76009 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KRT33AO76009 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.55■□□□□ 0.24
KRT33AO76009 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.55■□□□□ 0.24
KRT33AO76009 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.55■□□□□ 0.24
KRT33AO76009 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT33AO76009 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.55■□□□□ 0.24
KRT33AO76009 AC036111.1-201ENST00000533973 1582 ntBASIC16.55■□□□□ 0.24
KRT33AO76009 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
KRT33AO76009 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT33AO76009 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.55■□□□□ 0.24
KRT33AO76009 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
KRT33AO76009 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.54■□□□□ 0.24
KRT33AO76009 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT33AO76009 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.54■□□□□ 0.24
KRT33AO76009 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.54■□□□□ 0.24
KRT33AO76009 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.54■□□□□ 0.24
KRT33AO76009 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT33AO76009 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT33AO76009 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT33AO76009 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT33AO76009 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.54■□□□□ 0.24
KRT33AO76009 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT33AO76009 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT33AO76009 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.54■□□□□ 0.24
KRT33AO76009 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.54■□□□□ 0.24
KRT33AO76009 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.54■□□□□ 0.24
KRT33AO76009 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.54■□□□□ 0.24
KRT33AO76009 AC068587.9-201ENST00000641814 219 ntBASIC16.54■□□□□ 0.24
KRT33AO76009 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT33AO76009 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT33AO76009 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT33AO76009 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
KRT33AO76009 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT33AO76009 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT33AO76009 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT33AO76009 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT33AO76009 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
KRT33AO76009 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
KRT33AO76009 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT33AO76009 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.53■□□□□ 0.24
KRT33AO76009 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.53■□□□□ 0.24
KRT33AO76009 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT33AO76009 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT33AO76009 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
KRT33AO76009 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.53■□□□□ 0.24
KRT33AO76009 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.53■□□□□ 0.24
KRT33AO76009 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.53■□□□□ 0.24
KRT33AO76009 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
KRT33AO76009 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
KRT33AO76009 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.53■□□□□ 0.24
KRT33AO76009 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRT33AO76009 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.53■□□□□ 0.24
KRT33AO76009 AC113347.1-201ENST00000413321 391 ntBASIC16.53■□□□□ 0.24
KRT33AO76009 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.53■□□□□ 0.24
KRT33AO76009 MIR4674-201ENST00000582457 87 ntBASIC16.53■□□□□ 0.24
KRT33AO76009 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
KRT33AO76009 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT33AO76009 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.53■□□□□ 0.24
KRT33AO76009 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.53■□□□□ 0.24
KRT33AO76009 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
KRT33AO76009 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms