Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 IRX1P1-201ENST00000438849 1838 ntBASIC17.68■□□□□ 0.42
CNOT3O75175 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT3O75175 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT3O75175 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT3O75175 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT3O75175 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT3O75175 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.68■□□□□ 0.42
CNOT3O75175 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT3O75175 STARP1-201ENST00000397973 869 ntBASIC17.68■□□□□ 0.42
CNOT3O75175 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.68■□□□□ 0.42
CNOT3O75175 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT3O75175 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT3O75175 MCCD1P1-208ENST00000445732 328 ntBASIC17.68■□□□□ 0.42
CNOT3O75175 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.68■□□□□ 0.42
CNOT3O75175 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.68■□□□□ 0.42
CNOT3O75175 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CNOT3O75175 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.68■□□□□ 0.42
CNOT3O75175 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.68■□□□□ 0.42
CNOT3O75175 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.68■□□□□ 0.42
CNOT3O75175 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.68■□□□□ 0.42
CNOT3O75175 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CNOT3O75175 AC091076.1-201ENST00000610741 619 ntBASIC17.68■□□□□ 0.42
CNOT3O75175 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT3O75175 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CNOT3O75175 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT3O75175 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CNOT3O75175 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.68■□□□□ 0.42
CNOT3O75175 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.68■□□□□ 0.42
CNOT3O75175 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CNOT3O75175 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.68■□□□□ 0.42
CNOT3O75175 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.68■□□□□ 0.42
CNOT3O75175 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT3O75175 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT3O75175 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT3O75175 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT3O75175 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT3O75175 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
CNOT3O75175 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT3O75175 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.68■□□□□ 0.42
CNOT3O75175 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
CNOT3O75175 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
CNOT3O75175 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
CNOT3O75175 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT3O75175 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT3O75175 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT3O75175 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT3O75175 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT3O75175 AC011270.2-201ENST00000624293 2550 ntBASIC17.67■□□□□ 0.42
CNOT3O75175 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT3O75175 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT3O75175 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT3O75175 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT3O75175 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.67■□□□□ 0.42
CNOT3O75175 PCED1CP-201ENST00000419887 785 ntBASIC17.67■□□□□ 0.42
CNOT3O75175 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT3O75175 UPK3BP1-201ENST00000428678 509 ntBASIC17.67■□□□□ 0.42
CNOT3O75175 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.67■□□□□ 0.42
CNOT3O75175 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.67■□□□□ 0.42
CNOT3O75175 MIR3180-5-201ENST00000583743 153 ntBASIC17.67■□□□□ 0.42
CNOT3O75175 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.67■□□□□ 0.42
CNOT3O75175 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT3O75175 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.67■□□□□ 0.42
CNOT3O75175 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT3O75175 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.67■□□□□ 0.42
CNOT3O75175 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CNOT3O75175 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CNOT3O75175 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT3O75175 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT3O75175 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT3O75175 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT3O75175 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT3O75175 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT3O75175 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
CNOT3O75175 NOC2LP2-201ENST00000407594 1944 ntBASIC17.66■□□□□ 0.42
CNOT3O75175 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CNOT3O75175 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.66■□□□□ 0.42
CNOT3O75175 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT3O75175 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT3O75175 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT3O75175 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT3O75175 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CNOT3O75175 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.66■□□□□ 0.42
CNOT3O75175 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CNOT3O75175 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT3O75175 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT3O75175 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CNOT3O75175 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.66■□□□□ 0.42
CNOT3O75175 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.66■□□□□ 0.42
CNOT3O75175 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT3O75175 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.66■□□□□ 0.42
CNOT3O75175 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT3O75175 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT3O75175 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CNOT3O75175 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CNOT3O75175 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CNOT3O75175 AP000550.4-202ENST00000639755 178 ntBASIC17.66■□□□□ 0.42
CNOT3O75175 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT3O75175 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT3O75175 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT3O75175 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms