Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
BRD4O60885 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC25.16■■□□□ 1.62
BRD4O60885 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
BRD4O60885 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
BRD4O60885 EMD-201ENST00000369835 966 ntTSL 3 BASIC25.16■■□□□ 1.62
BRD4O60885 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
BRD4O60885 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC25.16■■□□□ 1.62
BRD4O60885 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC25.16■■□□□ 1.62
BRD4O60885 AC004263.2-201ENST00000617183 678 ntBASIC25.16■■□□□ 1.62
BRD4O60885 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
BRD4O60885 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
BRD4O60885 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
BRD4O60885 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC25.16■■□□□ 1.62
BRD4O60885 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC25.16■■□□□ 1.62
BRD4O60885 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC25.15■■□□□ 1.62
BRD4O60885 MADD-208ENST00000405573 1823 ntTSL 5 BASIC25.15■■□□□ 1.62
BRD4O60885 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
BRD4O60885 BICD1-207ENST00000551848 1962 ntBASIC25.15■■□□□ 1.62
BRD4O60885 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
BRD4O60885 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
BRD4O60885 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
BRD4O60885 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC25.15■■□□□ 1.62
BRD4O60885 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
BRD4O60885 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
BRD4O60885 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
BRD4O60885 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
BRD4O60885 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
BRD4O60885 ADK-206ENST00000541550 2222 ntTSL 2 BASIC25.15■■□□□ 1.62
BRD4O60885 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
BRD4O60885 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
BRD4O60885 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC25.15■■□□□ 1.62
BRD4O60885 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC25.15■■□□□ 1.62
BRD4O60885 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC25.15■■□□□ 1.62
BRD4O60885 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC25.15■■□□□ 1.62
BRD4O60885 PENK-208ENST00000523051 772 ntTSL 5 BASIC25.15■■□□□ 1.62
BRD4O60885 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC25.15■■□□□ 1.62
BRD4O60885 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC25.15■■□□□ 1.62
BRD4O60885 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
BRD4O60885 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC25.15■■□□□ 1.62
BRD4O60885 HLA-A-201ENST00000376802 1334 ntBASIC25.14■■□□□ 1.62
BRD4O60885 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
BRD4O60885 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC25.14■■□□□ 1.62
BRD4O60885 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.62
BRD4O60885 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
BRD4O60885 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
BRD4O60885 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
BRD4O60885 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC25.14■■□□□ 1.62
BRD4O60885 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
BRD4O60885 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
BRD4O60885 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC25.14■■□□□ 1.61
BRD4O60885 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC25.14■■□□□ 1.61
BRD4O60885 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
BRD4O60885 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC25.14■■□□□ 1.61
BRD4O60885 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.61
BRD4O60885 AC008687.5-201ENST00000593746 558 ntBASIC25.14■■□□□ 1.61
BRD4O60885 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
BRD4O60885 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
BRD4O60885 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
BRD4O60885 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
BRD4O60885 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC25.14■■□□□ 1.61
BRD4O60885 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
BRD4O60885 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
BRD4O60885 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
BRD4O60885 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
BRD4O60885 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
BRD4O60885 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
BRD4O60885 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
BRD4O60885 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
BRD4O60885 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC25.13■■□□□ 1.61
BRD4O60885 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC25.13■■□□□ 1.61
BRD4O60885 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
BRD4O60885 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC25.13■■□□□ 1.61
BRD4O60885 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
BRD4O60885 LSM5-204ENST00000409909 740 ntTSL 2 BASIC25.13■■□□□ 1.61
BRD4O60885 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC25.13■■□□□ 1.61
BRD4O60885 AC091607.1-201ENST00000490318 1060 ntBASIC25.13■■□□□ 1.61
BRD4O60885 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
BRD4O60885 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
BRD4O60885 BX640515.1-201ENST00000617215 977 ntBASIC25.13■■□□□ 1.61
BRD4O60885 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
BRD4O60885 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC25.13■■□□□ 1.61
BRD4O60885 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
BRD4O60885 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC25.13■■□□□ 1.61
BRD4O60885 AC135050.7-201ENST00000624508 2218 ntBASIC25.12■■□□□ 1.61
BRD4O60885 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
BRD4O60885 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
BRD4O60885 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
BRD4O60885 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
BRD4O60885 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
BRD4O60885 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC25.12■■□□□ 1.61
BRD4O60885 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC25.12■■□□□ 1.61
BRD4O60885 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC25.12■■□□□ 1.61
BRD4O60885 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC25.12■■□□□ 1.61
BRD4O60885 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
BRD4O60885 RNA5SP419-201ENST00000515908 135 ntBASIC25.12■■□□□ 1.61
BRD4O60885 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
BRD4O60885 CALM1-205ENST00000553542 877 ntTSL 5 BASIC25.12■■□□□ 1.61
BRD4O60885 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC25.12■■□□□ 1.61
BRD4O60885 BNIP3P18-201ENST00000593976 575 ntBASIC25.12■■□□□ 1.61
BRD4O60885 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms