Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF11O60813 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF11O60813 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PRAMEF11O60813 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
PRAMEF11O60813 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PRAMEF11O60813 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.46■□□□□ 0.55
PRAMEF11O60813 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.46■□□□□ 0.55
PRAMEF11O60813 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.46■□□□□ 0.55
PRAMEF11O60813 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF11O60813 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF11O60813 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
PRAMEF11O60813 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.46■□□□□ 0.55
PRAMEF11O60813 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF11O60813 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PRAMEF11O60813 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF11O60813 REXO1L9P-201ENST00000604264 2108 ntBASIC18.46■□□□□ 0.55
PRAMEF11O60813 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.46■□□□□ 0.55
PRAMEF11O60813 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF11O60813 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
PRAMEF11O60813 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
PRAMEF11O60813 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF11O60813 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.45■□□□□ 0.54
PRAMEF11O60813 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF11O60813 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF11O60813 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF11O60813 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF11O60813 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF11O60813 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF11O60813 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF11O60813 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF11O60813 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF11O60813 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF11O60813 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF11O60813 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF11O60813 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.45■□□□□ 0.54
PRAMEF11O60813 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF11O60813 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.45■□□□□ 0.54
PRAMEF11O60813 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.45■□□□□ 0.54
PRAMEF11O60813 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.45■□□□□ 0.54
PRAMEF11O60813 KRT8P26-201ENST00000534154 1276 ntBASIC18.45■□□□□ 0.54
PRAMEF11O60813 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.45■□□□□ 0.54
PRAMEF11O60813 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.45■□□□□ 0.54
PRAMEF11O60813 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.45■□□□□ 0.54
PRAMEF11O60813 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF11O60813 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PRAMEF11O60813 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.45■□□□□ 0.54
PRAMEF11O60813 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF11O60813 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF11O60813 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.45■□□□□ 0.54
PRAMEF11O60813 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.44■□□□□ 0.54
PRAMEF11O60813 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.44■□□□□ 0.54
PRAMEF11O60813 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PRAMEF11O60813 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.44■□□□□ 0.54
PRAMEF11O60813 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRAMEF11O60813 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.44■□□□□ 0.54
PRAMEF11O60813 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.44■□□□□ 0.54
PRAMEF11O60813 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.44■□□□□ 0.54
PRAMEF11O60813 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PRAMEF11O60813 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.44■□□□□ 0.54
PRAMEF11O60813 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRAMEF11O60813 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRAMEF11O60813 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRAMEF11O60813 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PRAMEF11O60813 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRAMEF11O60813 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.44■□□□□ 0.54
PRAMEF11O60813 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.44■□□□□ 0.54
PRAMEF11O60813 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PRAMEF11O60813 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PRAMEF11O60813 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.44■□□□□ 0.54
PRAMEF11O60813 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.44■□□□□ 0.54
PRAMEF11O60813 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PRAMEF11O60813 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.44■□□□□ 0.54
PRAMEF11O60813 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.44■□□□□ 0.54
PRAMEF11O60813 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.44■□□□□ 0.54
PRAMEF11O60813 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRAMEF11O60813 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.44■□□□□ 0.54
PRAMEF11O60813 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PRAMEF11O60813 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PRAMEF11O60813 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRAMEF11O60813 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PRAMEF11O60813 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRAMEF11O60813 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRAMEF11O60813 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRAMEF11O60813 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRAMEF11O60813 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRAMEF11O60813 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRAMEF11O60813 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRAMEF11O60813 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRAMEF11O60813 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRAMEF11O60813 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRAMEF11O60813 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRAMEF11O60813 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRAMEF11O60813 TSPY12P-201ENST00000421279 868 ntBASIC18.43■□□□□ 0.54
PRAMEF11O60813 KRT18P65-201ENST00000439811 1286 ntBASIC18.43■□□□□ 0.54
PRAMEF11O60813 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PRAMEF11O60813 AL121672.3-201ENST00000608644 468 ntBASIC18.43■□□□□ 0.54
PRAMEF11O60813 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.43■□□□□ 0.54
PRAMEF11O60813 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.43■□□□□ 0.54
PRAMEF11O60813 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.43■□□□□ 0.54
PRAMEF11O60813 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms