Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RIPK2O43353 AL355312.1-201ENST00000407115 2176 ntBASIC18.54■□□□□ 0.56
RIPK2O43353 AL163051.1-201ENST00000569214 1512 ntBASIC18.54■□□□□ 0.56
RIPK2O43353 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RIPK2O43353 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RIPK2O43353 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RIPK2O43353 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RIPK2O43353 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RIPK2O43353 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RIPK2O43353 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RIPK2O43353 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RIPK2O43353 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RIPK2O43353 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RIPK2O43353 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RIPK2O43353 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RIPK2O43353 TNRC18P3-201ENST00000441896 2691 ntBASIC18.53■□□□□ 0.56
RIPK2O43353 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RIPK2O43353 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.53■□□□□ 0.56
RIPK2O43353 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RIPK2O43353 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RIPK2O43353 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RIPK2O43353 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.53■□□□□ 0.56
RIPK2O43353 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RIPK2O43353 KRT16P1-201ENST00000399124 1418 ntBASIC18.53■□□□□ 0.56
RIPK2O43353 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RIPK2O43353 AC133681.1-201ENST00000465482 601 ntBASIC18.53■□□□□ 0.56
RIPK2O43353 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RIPK2O43353 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RIPK2O43353 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.53■□□□□ 0.56
RIPK2O43353 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RIPK2O43353 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RIPK2O43353 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.53■□□□□ 0.56
RIPK2O43353 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RIPK2O43353 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RIPK2O43353 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RIPK2O43353 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.52■□□□□ 0.56
RIPK2O43353 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RIPK2O43353 AC011676.5-201ENST00000624864 2660 ntBASIC18.52■□□□□ 0.56
RIPK2O43353 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RIPK2O43353 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.52■□□□□ 0.56
RIPK2O43353 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
RIPK2O43353 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RIPK2O43353 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RIPK2O43353 MIR149-201ENST00000384879 89 ntBASIC18.52■□□□□ 0.56
RIPK2O43353 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.52■□□□□ 0.56
RIPK2O43353 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RIPK2O43353 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RIPK2O43353 AC110285.5-201ENST00000611501 352 ntBASIC18.52■□□□□ 0.56
RIPK2O43353 AL031985.4-201ENST00000642138 673 ntBASIC18.52■□□□□ 0.56
RIPK2O43353 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RIPK2O43353 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RIPK2O43353 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RIPK2O43353 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RIPK2O43353 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RIPK2O43353 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RIPK2O43353 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RIPK2O43353 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.52■□□□□ 0.55
RIPK2O43353 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
RIPK2O43353 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RIPK2O43353 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RIPK2O43353 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RIPK2O43353 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.51■□□□□ 0.55
RIPK2O43353 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.51■□□□□ 0.55
RIPK2O43353 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RIPK2O43353 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RIPK2O43353 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RIPK2O43353 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.51■□□□□ 0.55
RIPK2O43353 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RIPK2O43353 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RIPK2O43353 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.51■□□□□ 0.55
RIPK2O43353 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RIPK2O43353 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RIPK2O43353 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
RIPK2O43353 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RIPK2O43353 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.51■□□□□ 0.55
RIPK2O43353 AC011506.1-201ENST00000474329 610 ntBASIC18.51■□□□□ 0.55
RIPK2O43353 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.51■□□□□ 0.55
RIPK2O43353 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RIPK2O43353 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.51■□□□□ 0.55
RIPK2O43353 AC104771.1-201ENST00000603335 964 ntBASIC18.51■□□□□ 0.55
RIPK2O43353 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
RIPK2O43353 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RIPK2O43353 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RIPK2O43353 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
RIPK2O43353 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RIPK2O43353 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.51■□□□□ 0.55
RIPK2O43353 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.51■□□□□ 0.55
RIPK2O43353 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RIPK2O43353 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RIPK2O43353 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.51■□□□□ 0.55
RIPK2O43353 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RIPK2O43353 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RIPK2O43353 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RIPK2O43353 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RIPK2O43353 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RIPK2O43353 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RIPK2O43353 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.5■□□□□ 0.55
RIPK2O43353 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RIPK2O43353 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RIPK2O43353 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms