Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CASQ2O14958 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CASQ2O14958 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
CASQ2O14958 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.32■□□□□ 0.36
CASQ2O14958 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ2O14958 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CASQ2O14958 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ2O14958 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ2O14958 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CASQ2O14958 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ2O14958 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.32■□□□□ 0.36
CASQ2O14958 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CASQ2O14958 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ2O14958 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.32■□□□□ 0.36
CASQ2O14958 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CASQ2O14958 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ2O14958 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CASQ2O14958 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ2O14958 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CASQ2O14958 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CASQ2O14958 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ2O14958 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.32■□□□□ 0.36
CASQ2O14958 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CASQ2O14958 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ2O14958 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ2O14958 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ2O14958 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ2O14958 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.32■□□□□ 0.36
CASQ2O14958 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.32■□□□□ 0.36
CASQ2O14958 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.32■□□□□ 0.36
CASQ2O14958 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ2O14958 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ2O14958 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CASQ2O14958 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ2O14958 AL357033.4-201ENST00000617703 1807 ntBASIC17.32■□□□□ 0.36
CASQ2O14958 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ2O14958 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ2O14958 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ2O14958 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.32■□□□□ 0.36
CASQ2O14958 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ2O14958 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CASQ2O14958 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CASQ2O14958 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.31■□□□□ 0.36
CASQ2O14958 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.31■□□□□ 0.36
CASQ2O14958 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ2O14958 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ2O14958 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.31■□□□□ 0.36
CASQ2O14958 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CASQ2O14958 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ2O14958 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.31■□□□□ 0.36
CASQ2O14958 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
CASQ2O14958 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ2O14958 PCDHB19P-201ENST00000570871 2371 ntBASIC17.31■□□□□ 0.36
CASQ2O14958 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ2O14958 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ2O14958 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ2O14958 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ2O14958 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
CASQ2O14958 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.31■□□□□ 0.36
CASQ2O14958 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.31■□□□□ 0.36
CASQ2O14958 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ2O14958 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ2O14958 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.31■□□□□ 0.36
CASQ2O14958 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.31■□□□□ 0.36
CASQ2O14958 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ2O14958 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ2O14958 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ2O14958 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
CASQ2O14958 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ2O14958 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.31■□□□□ 0.36
CASQ2O14958 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ2O14958 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
CASQ2O14958 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ2O14958 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ2O14958 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ2O14958 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ2O14958 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ2O14958 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.31■□□□□ 0.36
CASQ2O14958 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CASQ2O14958 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.3■□□□□ 0.36
CASQ2O14958 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CASQ2O14958 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CASQ2O14958 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CASQ2O14958 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CASQ2O14958 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CASQ2O14958 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.3■□□□□ 0.36
CASQ2O14958 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.3■□□□□ 0.36
CASQ2O14958 BID-214ENST00000617586 542 ntTSL 5 BASIC17.3■□□□□ 0.36
CASQ2O14958 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CASQ2O14958 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CASQ2O14958 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CASQ2O14958 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CASQ2O14958 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CASQ2O14958 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CASQ2O14958 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CASQ2O14958 KRT17P1-201ENST00000399211 1546 ntBASIC17.3■□□□□ 0.36
CASQ2O14958 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.3■□□□□ 0.36
CASQ2O14958 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CASQ2O14958 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
CASQ2O14958 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms