Protein–RNA interactions for Protein: O00421

CCRL2, C-C chemokine receptor-like 2, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCRL2O00421 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCRL2O00421 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.41■□□□□ 0.22
CCRL2O00421 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.41■□□□□ 0.22
CCRL2O00421 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CCRL2O00421 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCRL2O00421 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCRL2O00421 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
CCRL2O00421 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
CCRL2O00421 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.41■□□□□ 0.22
CCRL2O00421 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CCRL2O00421 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.41■□□□□ 0.22
CCRL2O00421 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.41■□□□□ 0.22
CCRL2O00421 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.41■□□□□ 0.22
CCRL2O00421 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.41■□□□□ 0.22
CCRL2O00421 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.41■□□□□ 0.22
CCRL2O00421 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CCRL2O00421 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCRL2O00421 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCRL2O00421 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCRL2O00421 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.41■□□□□ 0.22
CCRL2O00421 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCRL2O00421 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCRL2O00421 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCRL2O00421 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCRL2O00421 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCRL2O00421 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCRL2O00421 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CCRL2O00421 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.41■□□□□ 0.22
CCRL2O00421 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCRL2O00421 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.41■□□□□ 0.22
CCRL2O00421 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCRL2O00421 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCRL2O00421 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCRL2O00421 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CCRL2O00421 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCRL2O00421 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.4■□□□□ 0.22
CCRL2O00421 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCRL2O00421 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CCRL2O00421 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CCRL2O00421 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.4■□□□□ 0.22
CCRL2O00421 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCRL2O00421 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCRL2O00421 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CCRL2O00421 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCRL2O00421 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCRL2O00421 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCRL2O00421 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.4■□□□□ 0.22
CCRL2O00421 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCRL2O00421 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CCRL2O00421 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCRL2O00421 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CCRL2O00421 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.4■□□□□ 0.22
CCRL2O00421 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CCRL2O00421 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.4■□□□□ 0.22
CCRL2O00421 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.4■□□□□ 0.22
CCRL2O00421 AC083906.2-201ENST00000511578 360 ntBASIC16.4■□□□□ 0.22
CCRL2O00421 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.4■□□□□ 0.22
CCRL2O00421 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.4■□□□□ 0.22
CCRL2O00421 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.4■□□□□ 0.22
CCRL2O00421 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.4■□□□□ 0.22
CCRL2O00421 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCRL2O00421 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCRL2O00421 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCRL2O00421 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.4■□□□□ 0.22
CCRL2O00421 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CCRL2O00421 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCRL2O00421 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCRL2O00421 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CCRL2O00421 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCRL2O00421 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCRL2O00421 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCRL2O00421 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCRL2O00421 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.4■□□□□ 0.22
CCRL2O00421 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCRL2O00421 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CCRL2O00421 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CCRL2O00421 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CCRL2O00421 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
CCRL2O00421 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.39■□□□□ 0.22
CCRL2O00421 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCRL2O00421 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCRL2O00421 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.39■□□□□ 0.21
CCRL2O00421 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.39■□□□□ 0.21
CCRL2O00421 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.39■□□□□ 0.21
CCRL2O00421 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCRL2O00421 KRT8P3-201ENST00000519669 1449 ntBASIC16.39■□□□□ 0.21
CCRL2O00421 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCRL2O00421 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.39■□□□□ 0.21
CCRL2O00421 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCRL2O00421 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCRL2O00421 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.39■□□□□ 0.21
CCRL2O00421 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.39■□□□□ 0.21
CCRL2O00421 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.39■□□□□ 0.21
CCRL2O00421 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.39■□□□□ 0.21
CCRL2O00421 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.39■□□□□ 0.21
CCRL2O00421 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.39■□□□□ 0.21
CCRL2O00421 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.39■□□□□ 0.21
CCRL2O00421 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.39■□□□□ 0.21
CCRL2O00421 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.39■□□□□ 0.21
CCRL2O00421 AL121829.2-201ENST00000620908 328 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms