Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TAF4O00268 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.84■□□□□ 0.45
TAF4O00268 SAPCD2P3-201ENST00000455031 850 ntBASIC17.84■□□□□ 0.45
TAF4O00268 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.84■□□□□ 0.45
TAF4O00268 RNPS1P1-201ENST00000507437 918 ntBASIC17.84■□□□□ 0.45
TAF4O00268 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.84■□□□□ 0.45
TAF4O00268 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.84■□□□□ 0.45
TAF4O00268 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.84■□□□□ 0.45
TAF4O00268 AC099336.1-202ENST00000602961 463 ntBASIC17.84■□□□□ 0.45
TAF4O00268 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TAF4O00268 REXO1L6P-202ENST00000619970 1078 ntBASIC17.84■□□□□ 0.45
TAF4O00268 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TAF4O00268 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.84■□□□□ 0.45
TAF4O00268 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TAF4O00268 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.84■□□□□ 0.45
TAF4O00268 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TAF4O00268 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TAF4O00268 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TAF4O00268 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TAF4O00268 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.84■□□□□ 0.45
TAF4O00268 BCL2-203ENST00000589955 5011 ntBASIC17.84■□□□□ 0.45
TAF4O00268 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TAF4O00268 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TAF4O00268 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TAF4O00268 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.83■□□□□ 0.45
TAF4O00268 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TAF4O00268 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TAF4O00268 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
TAF4O00268 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TAF4O00268 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
TAF4O00268 LINC00167-201ENST00000530583 1419 ntBASIC17.83■□□□□ 0.45
TAF4O00268 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TAF4O00268 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TAF4O00268 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TAF4O00268 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TAF4O00268 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.83■□□□□ 0.44
TAF4O00268 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TAF4O00268 AL031284.1-201ENST00000419297 478 ntBASIC17.83■□□□□ 0.44
TAF4O00268 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.83■□□□□ 0.44
TAF4O00268 AC073648.2-201ENST00000510116 352 ntBASIC17.83■□□□□ 0.44
TAF4O00268 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.83■□□□□ 0.44
TAF4O00268 MIR3197-201ENST00000582241 73 ntBASIC17.83■□□□□ 0.44
TAF4O00268 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
TAF4O00268 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.83■□□□□ 0.44
TAF4O00268 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.83■□□□□ 0.44
TAF4O00268 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TAF4O00268 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TAF4O00268 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.83■□□□□ 0.44
TAF4O00268 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TAF4O00268 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
TAF4O00268 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TAF4O00268 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TAF4O00268 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TAF4O00268 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TAF4O00268 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TAF4O00268 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TAF4O00268 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.82■□□□□ 0.44
TAF4O00268 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TAF4O00268 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TAF4O00268 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TAF4O00268 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TAF4O00268 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TAF4O00268 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TAF4O00268 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TAF4O00268 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TAF4O00268 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TAF4O00268 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TAF4O00268 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TAF4O00268 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.82■□□□□ 0.44
TAF4O00268 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TAF4O00268 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.82■□□□□ 0.44
TAF4O00268 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.82■□□□□ 0.44
TAF4O00268 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TAF4O00268 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TAF4O00268 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.82■□□□□ 0.44
TAF4O00268 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.82■□□□□ 0.44
TAF4O00268 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TAF4O00268 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TAF4O00268 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.82■□□□□ 0.44
TAF4O00268 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TAF4O00268 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TAF4O00268 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TAF4O00268 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.82■□□□□ 0.44
TAF4O00268 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TAF4O00268 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TAF4O00268 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.82■□□□□ 0.44
TAF4O00268 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.82■□□□□ 0.44
TAF4O00268 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TAF4O00268 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TAF4O00268 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TAF4O00268 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TAF4O00268 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.81■□□□□ 0.44
TAF4O00268 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TAF4O00268 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TAF4O00268 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.81■□□□□ 0.44
TAF4O00268 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TAF4O00268 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TAF4O00268 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TAF4O00268 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
TAF4O00268 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms