Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 SERPINH1P1-201ENST00000419794 1249 ntBASIC12.97□□□□□ -0.33
LINC01549A6NIU2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 AL096828.2-201ENST00000567259 1965 ntBASIC12.97□□□□□ -0.33
LINC01549A6NIU2 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01549A6NIU2 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC12.96□□□□□ -0.33
LINC01549A6NIU2 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01549A6NIU2 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01549A6NIU2 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01549A6NIU2 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01549A6NIU2 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01549A6NIU2 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
LINC01549A6NIU2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
LINC01549A6NIU2 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01549A6NIU2 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
LINC01549A6NIU2 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC12.96□□□□□ -0.33
LINC01549A6NIU2 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01549A6NIU2 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01549A6NIU2 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01549A6NIU2 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
LINC01549A6NIU2 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01549A6NIU2 HTR7P1-201ENST00000538670 1336 ntBASIC12.96□□□□□ -0.33
LINC01549A6NIU2 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01549A6NIU2 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC12.96□□□□□ -0.33
LINC01549A6NIU2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01549A6NIU2 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01549A6NIU2 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
LINC01549A6NIU2 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC12.96□□□□□ -0.33
LINC01549A6NIU2 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01549A6NIU2 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC12.96□□□□□ -0.33
LINC01549A6NIU2 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01549A6NIU2 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC12.96□□□□□ -0.33
LINC01549A6NIU2 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01549A6NIU2 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01549A6NIU2 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01549A6NIU2 PRSS44-201ENST00000515154 1146 ntBASIC12.96□□□□□ -0.33
LINC01549A6NIU2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC12.96□□□□□ -0.33
LINC01549A6NIU2 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC12.96□□□□□ -0.33
LINC01549A6NIU2 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01549A6NIU2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01549A6NIU2 AL121832.2-201ENST00000610979 668 ntBASIC12.96□□□□□ -0.33
LINC01549A6NIU2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC12.96□□□□□ -0.33
LINC01549A6NIU2 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01549A6NIU2 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01549A6NIU2 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC01549A6NIU2 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LINC01549A6NIU2 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LINC01549A6NIU2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.34
LINC01549A6NIU2 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC01549A6NIU2 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
LINC01549A6NIU2 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LINC01549A6NIU2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms