Protein–RNA interactions for Protein: A5X5Y0

HTR3E, 5-hydroxytryptamine receptor 3E, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3EA5X5Y0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.92■□□□□ 0.3
HTR3EA5X5Y0 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.92■□□□□ 0.3
HTR3EA5X5Y0 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HTR3EA5X5Y0 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HTR3EA5X5Y0 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HTR3EA5X5Y0 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HTR3EA5X5Y0 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.91■□□□□ 0.3
HTR3EA5X5Y0 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HTR3EA5X5Y0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
HTR3EA5X5Y0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.91■□□□□ 0.3
HTR3EA5X5Y0 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HTR3EA5X5Y0 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HTR3EA5X5Y0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HTR3EA5X5Y0 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HTR3EA5X5Y0 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HTR3EA5X5Y0 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.91■□□□□ 0.3
HTR3EA5X5Y0 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.91■□□□□ 0.3
HTR3EA5X5Y0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HTR3EA5X5Y0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.91■□□□□ 0.3
HTR3EA5X5Y0 AC008040.2-201ENST00000461049 708 ntBASIC16.91■□□□□ 0.3
HTR3EA5X5Y0 AC116562.2-201ENST00000507042 360 ntBASIC16.91■□□□□ 0.3
HTR3EA5X5Y0 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.91■□□□□ 0.3
HTR3EA5X5Y0 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HTR3EA5X5Y0 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HTR3EA5X5Y0 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.91■□□□□ 0.3
HTR3EA5X5Y0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.91■□□□□ 0.3
HTR3EA5X5Y0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
HTR3EA5X5Y0 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HTR3EA5X5Y0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HTR3EA5X5Y0 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.91■□□□□ 0.3
HTR3EA5X5Y0 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HTR3EA5X5Y0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HTR3EA5X5Y0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HTR3EA5X5Y0 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HTR3EA5X5Y0 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HTR3EA5X5Y0 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HTR3EA5X5Y0 RCC2P3-201ENST00000418112 1537 ntBASIC16.91■□□□□ 0.3
HTR3EA5X5Y0 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTR3EA5X5Y0 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTR3EA5X5Y0 AC080080.1-201ENST00000625121 2420 ntBASIC16.9■□□□□ 0.3
HTR3EA5X5Y0 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HTR3EA5X5Y0 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HTR3EA5X5Y0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HTR3EA5X5Y0 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HTR3EA5X5Y0 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTR3EA5X5Y0 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.9■□□□□ 0.3
HTR3EA5X5Y0 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.9■□□□□ 0.3
HTR3EA5X5Y0 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
HTR3EA5X5Y0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.9■□□□□ 0.3
HTR3EA5X5Y0 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.9■□□□□ 0.3
HTR3EA5X5Y0 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTR3EA5X5Y0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
HTR3EA5X5Y0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.9■□□□□ 0.3
HTR3EA5X5Y0 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
HTR3EA5X5Y0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.9■□□□□ 0.3
HTR3EA5X5Y0 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.9■□□□□ 0.3
HTR3EA5X5Y0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTR3EA5X5Y0 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HTR3EA5X5Y0 ABALON-201ENST00000629058 1903 ntBASIC16.9■□□□□ 0.3
HTR3EA5X5Y0 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HTR3EA5X5Y0 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTR3EA5X5Y0 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HTR3EA5X5Y0 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HTR3EA5X5Y0 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.3
HTR3EA5X5Y0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HTR3EA5X5Y0 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HTR3EA5X5Y0 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HTR3EA5X5Y0 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HTR3EA5X5Y0 FLJ38576-201ENST00000623820 2459 ntBASIC16.89■□□□□ 0.29
HTR3EA5X5Y0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTR3EA5X5Y0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HTR3EA5X5Y0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HTR3EA5X5Y0 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTR3EA5X5Y0 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
HTR3EA5X5Y0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.89■□□□□ 0.29
HTR3EA5X5Y0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HTR3EA5X5Y0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.89■□□□□ 0.29
HTR3EA5X5Y0 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HTR3EA5X5Y0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTR3EA5X5Y0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTR3EA5X5Y0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.89■□□□□ 0.29
HTR3EA5X5Y0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTR3EA5X5Y0 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HTR3EA5X5Y0 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTR3EA5X5Y0 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTR3EA5X5Y0 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HTR3EA5X5Y0 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HTR3EA5X5Y0 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HTR3EA5X5Y0 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HTR3EA5X5Y0 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HTR3EA5X5Y0 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HTR3EA5X5Y0 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.88■□□□□ 0.29
HTR3EA5X5Y0 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HTR3EA5X5Y0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HTR3EA5X5Y0 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HTR3EA5X5Y0 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HTR3EA5X5Y0 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.88■□□□□ 0.29
HTR3EA5X5Y0 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
HTR3EA5X5Y0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HTR3EA5X5Y0 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms