Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC66A2RUB6 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC66A2RUB6 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC66A2RUB6 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC66A2RUB6 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC66A2RUB6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC66A2RUB6 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CCDC66A2RUB6 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC66A2RUB6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC66A2RUB6 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC66A2RUB6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC66A2RUB6 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC66A2RUB6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC66A2RUB6 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC66A2RUB6 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC66A2RUB6 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
CCDC66A2RUB6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC66A2RUB6 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC66A2RUB6 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC66A2RUB6 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC66A2RUB6 AL445675.2-201ENST00000620291 557 ntBASIC19.75■□□□□ 0.75
CCDC66A2RUB6 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.75■□□□□ 0.75
CCDC66A2RUB6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC66A2RUB6 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC66A2RUB6 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC66A2RUB6 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC66A2RUB6 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC66A2RUB6 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC66A2RUB6 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC66A2RUB6 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC66A2RUB6 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC66A2RUB6 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC66A2RUB6 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CCDC66A2RUB6 AC068418.2-201ENST00000577309 3703 ntBASIC19.75■□□□□ 0.75
CCDC66A2RUB6 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC66A2RUB6 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC66A2RUB6 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC66A2RUB6 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC66A2RUB6 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC66A2RUB6 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
CCDC66A2RUB6 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC66A2RUB6 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC66A2RUB6 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC66A2RUB6 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC66A2RUB6 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CCDC66A2RUB6 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC66A2RUB6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC66A2RUB6 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CCDC66A2RUB6 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC66A2RUB6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC66A2RUB6 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC66A2RUB6 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
CCDC66A2RUB6 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC66A2RUB6 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC66A2RUB6 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.74■□□□□ 0.75
CCDC66A2RUB6 AC068587.9-201ENST00000641814 219 ntBASIC19.74■□□□□ 0.75
CCDC66A2RUB6 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CCDC66A2RUB6 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC66A2RUB6 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC66A2RUB6 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC66A2RUB6 KRT8P11-201ENST00000409686 1436 ntBASIC19.74■□□□□ 0.75
CCDC66A2RUB6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC66A2RUB6 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC66A2RUB6 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC66A2RUB6 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC66A2RUB6 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC66A2RUB6 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC66A2RUB6 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC66A2RUB6 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC66A2RUB6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC66A2RUB6 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CCDC66A2RUB6 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CCDC66A2RUB6 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
CCDC66A2RUB6 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC66A2RUB6 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC66A2RUB6 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC66A2RUB6 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC66A2RUB6 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC66A2RUB6 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC66A2RUB6 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC66A2RUB6 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC66A2RUB6 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC66A2RUB6 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC66A2RUB6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC66A2RUB6 MTMR9LP-203ENST00000426597 1545 ntBASIC19.73■□□□□ 0.75
CCDC66A2RUB6 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC66A2RUB6 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.73■□□□□ 0.75
CCDC66A2RUB6 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC66A2RUB6 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC66A2RUB6 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC66A2RUB6 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC66A2RUB6 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CCDC66A2RUB6 PRSS44-201ENST00000515154 1146 ntBASIC19.73■□□□□ 0.75
CCDC66A2RUB6 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC66A2RUB6 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC66A2RUB6 AC131212.4-201ENST00000623606 975 ntBASIC19.73■□□□□ 0.75
CCDC66A2RUB6 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC66A2RUB6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC66A2RUB6 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC66A2RUB6 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms