Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
LOC102724428A0A0B4J2F2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
LOC102724428A0A0B4J2F2 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LOC102724428A0A0B4J2F2 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
LOC102724428A0A0B4J2F2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
LOC102724428A0A0B4J2F2 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC23.11■■□□□ 1.29
LOC102724428A0A0B4J2F2 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC23.11■■□□□ 1.29
LOC102724428A0A0B4J2F2 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LOC102724428A0A0B4J2F2 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LOC102724428A0A0B4J2F2 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC23.11■■□□□ 1.29
LOC102724428A0A0B4J2F2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.11■■□□□ 1.29
LOC102724428A0A0B4J2F2 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LOC102724428A0A0B4J2F2 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC23.11■■□□□ 1.29
LOC102724428A0A0B4J2F2 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
LOC102724428A0A0B4J2F2 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
LOC102724428A0A0B4J2F2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
LOC102724428A0A0B4J2F2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
LOC102724428A0A0B4J2F2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
LOC102724428A0A0B4J2F2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
LOC102724428A0A0B4J2F2 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC23.1■■□□□ 1.29
LOC102724428A0A0B4J2F2 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC23.1■■□□□ 1.29
LOC102724428A0A0B4J2F2 COA5-202ENST00000409997 557 ntTSL 4 BASIC23.1■■□□□ 1.29
LOC102724428A0A0B4J2F2 AC023274.1-201ENST00000418278 595 ntBASIC23.1■■□□□ 1.29
LOC102724428A0A0B4J2F2 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC23.1■■□□□ 1.29
LOC102724428A0A0B4J2F2 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC23.1■■□□□ 1.29
LOC102724428A0A0B4J2F2 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC23.1■■□□□ 1.29
LOC102724428A0A0B4J2F2 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC23.1■■□□□ 1.29
LOC102724428A0A0B4J2F2 LINC02084-201ENST00000606069 1096 ntBASIC23.1■■□□□ 1.29
LOC102724428A0A0B4J2F2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
LOC102724428A0A0B4J2F2 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
LOC102724428A0A0B4J2F2 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
LOC102724428A0A0B4J2F2 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
LOC102724428A0A0B4J2F2 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
LOC102724428A0A0B4J2F2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC23.1■■□□□ 1.29
LOC102724428A0A0B4J2F2 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
LOC102724428A0A0B4J2F2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC23.09■■□□□ 1.29
LOC102724428A0A0B4J2F2 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC23.09■■□□□ 1.29
LOC102724428A0A0B4J2F2 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LOC102724428A0A0B4J2F2 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC23.09■■□□□ 1.29
LOC102724428A0A0B4J2F2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
LOC102724428A0A0B4J2F2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LOC102724428A0A0B4J2F2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
LOC102724428A0A0B4J2F2 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LOC102724428A0A0B4J2F2 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC23.09■■□□□ 1.29
LOC102724428A0A0B4J2F2 BX005266.1-201ENST00000473402 457 ntBASIC23.09■■□□□ 1.29
LOC102724428A0A0B4J2F2 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
LOC102724428A0A0B4J2F2 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC23.09■■□□□ 1.29
LOC102724428A0A0B4J2F2 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC23.09■■□□□ 1.29
LOC102724428A0A0B4J2F2 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC23.09■■□□□ 1.29
LOC102724428A0A0B4J2F2 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC23.09■■□□□ 1.29
LOC102724428A0A0B4J2F2 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC23.09■■□□□ 1.29
LOC102724428A0A0B4J2F2 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LOC102724428A0A0B4J2F2 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
LOC102724428A0A0B4J2F2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LOC102724428A0A0B4J2F2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LOC102724428A0A0B4J2F2 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC23.09■■□□□ 1.29
LOC102724428A0A0B4J2F2 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
LOC102724428A0A0B4J2F2 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
LOC102724428A0A0B4J2F2 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC23.08■■□□□ 1.29
LOC102724428A0A0B4J2F2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
LOC102724428A0A0B4J2F2 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
LOC102724428A0A0B4J2F2 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.29
LOC102724428A0A0B4J2F2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
LOC102724428A0A0B4J2F2 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
LOC102724428A0A0B4J2F2 AC079776.2-201ENST00000641154 1609 ntBASIC23.08■■□□□ 1.29
LOC102724428A0A0B4J2F2 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
LOC102724428A0A0B4J2F2 SNCG-201ENST00000348795 684 ntTSL 2 BASIC23.08■■□□□ 1.29
LOC102724428A0A0B4J2F2 BEX3-201ENST00000361298 921 ntTSL 2 BASIC23.08■■□□□ 1.29
LOC102724428A0A0B4J2F2 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LOC102724428A0A0B4J2F2 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LOC102724428A0A0B4J2F2 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC23.08■■□□□ 1.29
LOC102724428A0A0B4J2F2 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC23.08■■□□□ 1.29
LOC102724428A0A0B4J2F2 KRT18P27-201ENST00000427733 1299 ntBASIC23.08■■□□□ 1.29
LOC102724428A0A0B4J2F2 AC007967.3-201ENST00000434308 558 ntBASIC23.08■■□□□ 1.29
LOC102724428A0A0B4J2F2 DNAJB3-202ENST00000449667 1266 ntBASIC23.08■■□□□ 1.29
LOC102724428A0A0B4J2F2 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC23.08■■□□□ 1.29
LOC102724428A0A0B4J2F2 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC23.08■■□□□ 1.29
LOC102724428A0A0B4J2F2 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
LOC102724428A0A0B4J2F2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LOC102724428A0A0B4J2F2 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC23.08■■□□□ 1.29
LOC102724428A0A0B4J2F2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LOC102724428A0A0B4J2F2 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC23.08■■□□□ 1.28
LOC102724428A0A0B4J2F2 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC23.08■■□□□ 1.28
LOC102724428A0A0B4J2F2 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
LOC102724428A0A0B4J2F2 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC23.08■■□□□ 1.28
LOC102724428A0A0B4J2F2 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC23.08■■□□□ 1.28
LOC102724428A0A0B4J2F2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LOC102724428A0A0B4J2F2 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
LOC102724428A0A0B4J2F2 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC23.07■■□□□ 1.28
LOC102724428A0A0B4J2F2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LOC102724428A0A0B4J2F2 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
LOC102724428A0A0B4J2F2 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
LOC102724428A0A0B4J2F2 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC23.07■■□□□ 1.28
LOC102724428A0A0B4J2F2 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
LOC102724428A0A0B4J2F2 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC23.07■■□□□ 1.28
LOC102724428A0A0B4J2F2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC23.07■■□□□ 1.28
LOC102724428A0A0B4J2F2 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LOC102724428A0A0B4J2F2 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
LOC102724428A0A0B4J2F2 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LOC102724428A0A0B4J2F2 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms