Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCA3PQ9Y6N3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
CLCA3PQ9Y6N3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.27■□□□□ 0.36
CLCA3PQ9Y6N3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCA3PQ9Y6N3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
CLCA3PQ9Y6N3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLCA3PQ9Y6N3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CLCA3PQ9Y6N3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CLCA3PQ9Y6N3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.27■□□□□ 0.35
CLCA3PQ9Y6N3 MYLKP1-201ENST00000509077 1580 ntBASIC17.27■□□□□ 0.35
CLCA3PQ9Y6N3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CLCA3PQ9Y6N3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.27■□□□□ 0.35
CLCA3PQ9Y6N3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.27■□□□□ 0.35
CLCA3PQ9Y6N3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CLCA3PQ9Y6N3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CLCA3PQ9Y6N3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CLCA3PQ9Y6N3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CLCA3PQ9Y6N3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CLCA3PQ9Y6N3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLCA3PQ9Y6N3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLCA3PQ9Y6N3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLCA3PQ9Y6N3 AL499627.1-201ENST00000569373 2188 ntBASIC17.26■□□□□ 0.35
CLCA3PQ9Y6N3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
CLCA3PQ9Y6N3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLCA3PQ9Y6N3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.26■□□□□ 0.35
CLCA3PQ9Y6N3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CLCA3PQ9Y6N3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLCA3PQ9Y6N3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLCA3PQ9Y6N3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CLCA3PQ9Y6N3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLCA3PQ9Y6N3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLCA3PQ9Y6N3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.26■□□□□ 0.35
CLCA3PQ9Y6N3 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.26■□□□□ 0.35
CLCA3PQ9Y6N3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLCA3PQ9Y6N3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLCA3PQ9Y6N3 AC087388.1-201ENST00000571370 1112 ntBASIC17.26■□□□□ 0.35
CLCA3PQ9Y6N3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLCA3PQ9Y6N3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
CLCA3PQ9Y6N3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLCA3PQ9Y6N3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CLCA3PQ9Y6N3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLCA3PQ9Y6N3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLCA3PQ9Y6N3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLCA3PQ9Y6N3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLCA3PQ9Y6N3 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLCA3PQ9Y6N3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLCA3PQ9Y6N3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.26■□□□□ 0.35
CLCA3PQ9Y6N3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLCA3PQ9Y6N3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLCA3PQ9Y6N3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLCA3PQ9Y6N3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLCA3PQ9Y6N3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCA3PQ9Y6N3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
CLCA3PQ9Y6N3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.25■□□□□ 0.35
CLCA3PQ9Y6N3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLCA3PQ9Y6N3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CLCA3PQ9Y6N3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCA3PQ9Y6N3 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CLCA3PQ9Y6N3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.25■□□□□ 0.35
CLCA3PQ9Y6N3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCA3PQ9Y6N3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLCA3PQ9Y6N3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCA3PQ9Y6N3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCA3PQ9Y6N3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.25■□□□□ 0.35
CLCA3PQ9Y6N3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.25■□□□□ 0.35
CLCA3PQ9Y6N3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.25■□□□□ 0.35
CLCA3PQ9Y6N3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLCA3PQ9Y6N3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.25■□□□□ 0.35
CLCA3PQ9Y6N3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.25■□□□□ 0.35
CLCA3PQ9Y6N3 AL157888.1-201ENST00000631930 593 ntBASIC17.25■□□□□ 0.35
CLCA3PQ9Y6N3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCA3PQ9Y6N3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCA3PQ9Y6N3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CLCA3PQ9Y6N3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLCA3PQ9Y6N3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLCA3PQ9Y6N3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCA3PQ9Y6N3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCA3PQ9Y6N3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLCA3PQ9Y6N3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCA3PQ9Y6N3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCA3PQ9Y6N3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.25■□□□□ 0.35
CLCA3PQ9Y6N3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCA3PQ9Y6N3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.24■□□□□ 0.35
CLCA3PQ9Y6N3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCA3PQ9Y6N3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCA3PQ9Y6N3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.24■□□□□ 0.35
CLCA3PQ9Y6N3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCA3PQ9Y6N3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCA3PQ9Y6N3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLCA3PQ9Y6N3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLCA3PQ9Y6N3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCA3PQ9Y6N3 ARMC10P1-201ENST00000313754 855 ntBASIC17.24■□□□□ 0.35
CLCA3PQ9Y6N3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCA3PQ9Y6N3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCA3PQ9Y6N3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.24■□□□□ 0.35
CLCA3PQ9Y6N3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
CLCA3PQ9Y6N3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLCA3PQ9Y6N3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.24■□□□□ 0.35
CLCA3PQ9Y6N3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.24■□□□□ 0.35
CLCA3PQ9Y6N3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms